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San Francisco Bay Area United States
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Bioinformatics Scientist, Biocuration Lead at Lawrence Berkeley National Laboratory
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About
Presentations given as member of the Berkeley Bioinformatics Open-Source Projects (BBOP) in the Joint Genome Institute (JGI) at LBL, where I provide evolutionary and biologically relevant perspectives to the development of genome annotation editing tools.
At the time I was part of the development teams for Web Apollo - a web-based annotation editor designed to support community-based curation of genomes - and the Gene Ontology Consortium. I co-lead the Community Curation Group within the global initiative to sequence and annotate the genomes of 5,000 arthropods (i5K Initiative), and I was a member of the Executive Committee of the International Society for Biocuration (ISB).
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genome annotation
web apollo
annotation
genomics
genome
apollo
biocuration
bioinformatics
berkeley lab
i5k
curation
genome visualization
berkeley bop
community
arthropods
collaboration
gene ontology
gene ontology consortium
jbrowse
open source
13arthgen
isb2013
noctua
gmod
biocuration.
term enrichment
gene ontology website
bosc
lessons learned.
ontology
agr
crowdsourcing
snail
term representation
genom
visualization
bios
data visualization
data annotation
recombination.
pantherdb
panther database
paint
phylogenetics
koala
manakinrcn
research coordination network
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