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Organization / Workplace
Greater New York City Area United States
Occupation
Director, Research Informatics at Northwell Health
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About
As a Computational Biologist, my role is to build and execute strategies for development of pipeline solutions for analysis of next generation sequencing data in both clinical & research setting. I focus primarily on five core areas: genome variant calling & filtering, genome assessment, genome analysis and assembly, tools development, and support. I thrive in both independent and team-oriented work environments and can effectively represent the company in professional settings. Buzz me here: rons dot shah at gmail dot com Specialties: Programming in Perl, Python, R, Matlab. Next Generation Sequence Assembly and Analysis, Somatic/Germline Variation Calling, Structural Variation De...
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Presentations(6)Ìý

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Comparison of LUMPY vs. DELLY for structural variant detection
Comparison of LUMPY vs. DELLY for structural variant detectionComparison of LUMPY vs. DELLY for structural variant detection
Comparison of LUMPY vs. DELLY for structural variant detection
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The IMPACT of INDEL realignment: Detecting insertions and deletions longer than 30 base pairs with ABRA
The IMPACT of INDEL realignment: Detecting insertions and deletions longer than 30 base pairs with ABRAThe IMPACT of INDEL realignment: Detecting insertions and deletions longer than 30 base pairs with ABRA
The IMPACT of INDEL realignment: Detecting insertions and deletions longer than 30 base pairs with ABRA
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Developing a framework for for detection of low frequency somatic genetic alterations in targeted sequencing data
Developing a framework for for detection of low frequency somatic genetic alterations in targeted sequencing dataDeveloping a framework for for detection of low frequency somatic genetic alterations in targeted sequencing data
Developing a framework for for detection of low frequency somatic genetic alterations in targeted sequencing data
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Documents(2)Ìý

Poster at EMBL: Diagnosis and monitoring of Leptomeningeal Disease using Circulating free DNA in the cerebrospinal fluid (CSF cfDNA)
Poster at EMBL: Diagnosis and monitoring of Leptomeningeal Disease using Circulating free DNA in the cerebrospinal fluid (CSF cfDNA) Poster at EMBL: Diagnosis and monitoring of Leptomeningeal Disease using Circulating free DNA in the cerebrospinal fluid (CSF cfDNA)
Poster at EMBL: Diagnosis and monitoring of Leptomeningeal Disease using Circulating free DNA in the cerebrospinal fluid (CSF cfDNA)
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Detecting clinically actionable somatic structural aberrations from targeted sequencing data
Detecting clinically actionable somatic structural aberrations from targeted sequencing dataDetecting clinically actionable somatic structural aberrations from targeted sequencing data
Detecting clinically actionable somatic structural aberrations from targeted sequencing data
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