�ݺ�ߣshows by User: ChristaWoodley

�ݺ�ߣshows by User: ChristaWoodley / http://www.slideshare.net/images/logo.gif �ݺ�ߣshows by User: ChristaWoodley / Sun, 15 Sep 2013 20:06:17 GMT �ݺ�ߣShare feed for �ݺ�ߣshows by User: ChristaWoodley 2013 AFS Juvenile Chinook Prolonged Exposure to MS-222_Katie Wagner /slideshow/anesthetic-20130715v2/26216928 anesthetic20130715v2-130915200618-phpapp02
Many studies have investigated the effects transmitters (acoustic or radio) have on the condition, behavior, and survival of fish; however, few studies have investigated this in relation to anesthetic exposure. We investigated stress responses to prolonged MS-222 exposure after stage 4 anesthetic induction in surgically implanted juvenile Chinook salmon Oncorhynchus tshawytscha. Survival, tag loss, plasma cortisol concentration, and blood [Na+], [K+], [Ca2+], and pH were measured immediately following anesthetic exposure and surgical implantation. Responses were also measured 1, 7, and 14 days post-treatment. Throughout the study, there were no mortalities or tag loss. MS-222 was effective at delaying cortisol release, but anesthetic exposure did result in osmotic disturbances, with greater variation in longer MS-222 time exposures. From day 1 to day 14, [Na+], [Ca2+], and pH significantly decreased, while cortisol significantly increased in MS-222 exposed fish and was exacerbated by surgical implantation. There was a significant interaction between MS-222 time exposure and observation day for [Na+], [Ca2+], [K+], and pH; variations were seen in the longer time exposures, although not consistently. Stress responses suggest that increased exposure to MS-222 can lead to elevated stress in surgically implanted fish. ]]>
Many studies have investigated the effects transmitters (acoustic or radio) have on the condition, behavior, and survival of fish; however, few studies have investigated this in relation to anesthetic exposure. We investigated stress responses to prolonged MS-222 exposure after stage 4 anesthetic induction in surgically implanted juvenile Chinook salmon Oncorhynchus tshawytscha. Survival, tag loss, plasma cortisol concentration, and blood [Na+], [K+], [Ca2+], and pH were measured immediately following anesthetic exposure and surgical implantation. Responses were also measured 1, 7, and 14 days post-treatment. Throughout the study, there were no mortalities or tag loss. MS-222 was effective at delaying cortisol release, but anesthetic exposure did result in osmotic disturbances, with greater variation in longer MS-222 time exposures. From day 1 to day 14, [Na+], [Ca2+], and pH significantly decreased, while cortisol significantly increased in MS-222 exposed fish and was exacerbated by surgical implantation. There was a significant interaction between MS-222 time exposure and observation day for [Na+], [Ca2+], [K+], and pH; variations were seen in the longer time exposures, although not consistently. Stress responses suggest that increased exposure to MS-222 can lead to elevated stress in surgically implanted fish. ]]> Sun, 15 Sep 2013 20:06:17 GMT /slideshow/anesthetic-20130715v2/26216928 ChristaWoodley@slideshare.net(ChristaWoodley) 2013 AFS Juvenile Chinook Prolonged Exposure to MS-222_Katie Wagner ChristaWoodley Many studies have investigated the effects transmitters (acoustic or radio) have on the condition, behavior, and survival of fish; however, few studies have investigated this in relation to anesthetic exposure. We investigated stress responses to prolonged MS-222 exposure after stage 4 anesthetic induction in surgically implanted juvenile Chinook salmon Oncorhynchus tshawytscha. Survival, tag loss, plasma cortisol concentration, and blood [Na+], [K+], [Ca2+], and pH were measured immediately following anesthetic exposure and surgical implantation. Responses were also measured 1, 7, and 14 days post-treatment. Throughout the study, there were no mortalities or tag loss. MS-222 was effective at delaying cortisol release, but anesthetic exposure did result in osmotic disturbances, with greater variation in longer MS-222 time exposures. From day 1 to day 14, [Na+], [Ca2+], and pH significantly decreased, while cortisol significantly increased in MS-222 exposed fish and was exacerbated by surgical implantation. There was a significant interaction between MS-222 time exposure and observation day for [Na+], [Ca2+], [K+], and pH; variations were seen in the longer time exposures, although not consistently. Stress responses suggest that increased exposure to MS-222 can lead to elevated stress in surgically implanted fish. <img style="border:1px solid #C3E6D8;float:right;" alt="" src="https://cdn.slidesharecdn.com/ss_thumbnails/anesthetic20130715v2-130915200618-phpapp02-thumbnail.jpg?width=120&height=120&fit=bounds" /> Many studies have investigated the effects transmitters (acoustic or radio) have on the condition, behavior, and survival of fish; however, few studies have investigated this in relation to anesthetic exposure. We investigated stress responses to prolonged MS-222 exposure after stage 4 anesthetic induction in surgically implanted juvenile Chinook salmon Oncorhynchus tshawytscha. Survival, tag loss, plasma cortisol concentration, and blood [Na+], [K+], [Ca2+], and pH were measured immediately following anesthetic exposure and surgical implantation. Responses were also measured 1, 7, and 14 days post-treatment. Throughout the study, there were no mortalities or tag loss. MS-222 was effective at delaying cortisol release, but anesthetic exposure did result in osmotic disturbances, with greater variation in longer MS-222 time exposures. From day 1 to day 14, [Na+], [Ca2+], and pH significantly decreased, while cortisol significantly increased in MS-222 exposed fish and was exacerbated by surgical implantation. There was a significant interaction between MS-222 time exposure and observation day for [Na+], [Ca2+], [K+], and pH; variations were seen in the longer time exposures, although not consistently. Stress responses suggest that increased exposure to MS-222 can lead to elevated stress in surgically implanted fish.

2013 AFS Juvenile Chinook Prolonged Exposure to MS-222_Katie Wagner from Christa Woodley

]]> 307 2 https://cdn.slidesharecdn.com/ss_thumbnails/anesthetic20130715v2-130915200618-phpapp02-thumbnail.jpg?width=120&height=120&fit=bounds presentation White http://activitystrea.ms/schema/1.0/post

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0 2013 AFS Sustained Noise Effects_Christa Woodley /slideshow/tues-hoffman-0900cwoodleynoise/26216575 tueshoffman0900cwoodleynoise-130915193945-phpapp01
In recent years, the potential impact of underwater sounds associated with drilling and dredging operations are under scrutiny by regulatory agencies. Underwater noise generated from petroleum industry seismic surveys and construction activities such as pile-driving have been identified sublethal and lethal to fish and marine mammals. The NMFS is currently developing guidelines for determining sound pressure level thresholds for fishes and marine mammals. Most scientific literature pertaining underwater sound effects on fishes have largely resulted from pile driving operations. Drilling sound ranges from 100 to 220 dB re 1 µPa up to distance of 800 m. To better understand the effects of underwater sound from hydraulic drilling operations, a long-term monitor approach is needed using passive acoustics (PAM) combined with the FIT (Fish Index of Trauma) model. This presentation focuses on the development of this model system with a case study of fish injury from underwater noise. The critical issues addressed are generated sounds relative to ambient noise, and how to assess sound effects on fish.]]>
In recent years, the potential impact of underwater sounds associated with drilling and dredging operations are under scrutiny by regulatory agencies. Underwater noise generated from petroleum industry seismic surveys and construction activities such as pile-driving have been identified sublethal and lethal to fish and marine mammals. The NMFS is currently developing guidelines for determining sound pressure level thresholds for fishes and marine mammals. Most scientific literature pertaining underwater sound effects on fishes have largely resulted from pile driving operations. Drilling sound ranges from 100 to 220 dB re 1 µPa up to distance of 800 m. To better understand the effects of underwater sound from hydraulic drilling operations, a long-term monitor approach is needed using passive acoustics (PAM) combined with the FIT (Fish Index of Trauma) model. This presentation focuses on the development of this model system with a case study of fish injury from underwater noise. The critical issues addressed are generated sounds relative to ambient noise, and how to assess sound effects on fish.]]> Sun, 15 Sep 2013 19:39:45 GMT /slideshow/tues-hoffman-0900cwoodleynoise/26216575 ChristaWoodley@slideshare.net(ChristaWoodley) 2013 AFS Sustained Noise Effects_Christa Woodley ChristaWoodley In recent years, the potential impact of underwater sounds associated with drilling and dredging operations are under scrutiny by regulatory agencies. Underwater noise generated from petroleum industry seismic surveys and construction activities such as pile-driving have been identified sublethal and lethal to fish and marine mammals. The NMFS is currently developing guidelines for determining sound pressure level thresholds for fishes and marine mammals. Most scientific literature pertaining underwater sound effects on fishes have largely resulted from pile driving operations. Drilling sound ranges from 100 to 220 dB re 1 µPa up to distance of 800 m. To better understand the effects of underwater sound from hydraulic drilling operations, a long-term monitor approach is needed using passive acoustics (PAM) combined with the FIT (Fish Index of Trauma) model. This presentation focuses on the development of this model system with a case study of fish injury from underwater noise. The critical issues addressed are generated sounds relative to ambient noise, and how to assess sound effects on fish. <img style="border:1px solid #C3E6D8;float:right;" alt="" src="https://cdn.slidesharecdn.com/ss_thumbnails/tueshoffman0900cwoodleynoise-130915193945-phpapp01-thumbnail.jpg?width=120&height=120&fit=bounds" /> In recent years, the potential impact of underwater sounds associated with drilling and dredging operations are under scrutiny by regulatory agencies. Underwater noise generated from petroleum industry seismic surveys and construction activities such as pile-driving have been identified sublethal and lethal to fish and marine mammals. The NMFS is currently developing guidelines for determining sound pressure level thresholds for fishes and marine mammals. Most scientific literature pertaining underwater sound effects on fishes have largely resulted from pile driving operations. Drilling sound ranges from 100 to 220 dB re 1 µPa up to distance of 800 m. To better understand the effects of underwater sound from hydraulic drilling operations, a long-term monitor approach is needed using passive acoustics (PAM) combined with the FIT (Fish Index of Trauma) model. This presentation focuses on the development of this model system with a case study of fish injury from underwater noise. The critical issues addressed are generated sounds relative to ambient noise, and how to assess sound effects on fish.

2013 AFS Sustained Noise Effects_Christa Woodley from Christa Woodley

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0 2013 ICEEFP 5 yrs of Chinook Passage Through JDA_Mike Greiner /slideshow/mike-greiner-jda-sth-passage-20130625/24391443 mikegreinerjdasthpassage20130625-130718111435-phpapp02
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]]> Thu, 18 Jul 2013 11:14:34 GMT /slideshow/mike-greiner-jda-sth-passage-20130625/24391443 ChristaWoodley@slideshare.net(ChristaWoodley) 2013 ICEEFP 5 yrs of Chinook Passage Through JDA_Mike Greiner ChristaWoodley <img style="border:1px solid #C3E6D8;float:right;" alt="" src="https://cdn.slidesharecdn.com/ss_thumbnails/mikegreinerjdasthpassage20130625-130718111435-phpapp02-thumbnail.jpg?width=120&height=120&fit=bounds" />

2013 ICEEFP 5 yrs of Chinook Passage Through JDA_Mike Greiner from Christa Woodley

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0 2013 ICEEFP 3D Tracking Error Analyses_Darin Etherington /slideshow/iceefp-darin-etherington-error-analyses/24390161 darinetheringtonpsmfc-130718105547-phpapp02
To 3-D track acoustically tagged fish with measured certainty, error analyses are needed to verify the tracking system‘s performance. The methods detailed below utilize JSATS cabled hydrophone array systems and acoustic micro-transmitters. These processes are conducted after deployment of the array systems, and verify the positional accuracy of tagged fish movements through the tracking baseline of a detection array. ]]>
To 3-D track acoustically tagged fish with measured certainty, error analyses are needed to verify the tracking system‘s performance. The methods detailed below utilize JSATS cabled hydrophone array systems and acoustic micro-transmitters. These processes are conducted after deployment of the array systems, and verify the positional accuracy of tagged fish movements through the tracking baseline of a detection array. ]]> Thu, 18 Jul 2013 10:55:47 GMT /slideshow/iceefp-darin-etherington-error-analyses/24390161 ChristaWoodley@slideshare.net(ChristaWoodley) 2013 ICEEFP 3D Tracking Error Analyses_Darin Etherington ChristaWoodley To 3-D track acoustically tagged fish with measured certainty, error analyses are needed to verify the tracking system‘s performance. The methods detailed below utilize JSATS cabled hydrophone array systems and acoustic micro-transmitters. These processes are conducted after deployment of the array systems, and verify the positional accuracy of tagged fish movements through the tracking baseline of a detection array. <img style="border:1px solid #C3E6D8;float:right;" alt="" src="https://cdn.slidesharecdn.com/ss_thumbnails/darinetheringtonpsmfc-130718105547-phpapp02-thumbnail.jpg?width=120&height=120&fit=bounds" /> To 3-D track acoustically tagged fish with measured certainty, error analyses are needed to verify the tracking system‘s performance. The methods detailed below utilize JSATS cabled hydrophone array systems and acoustic micro-transmitters. These processes are conducted after deployment of the array systems, and verify the positional accuracy of tagged fish movements through the tracking baseline of a detection array.

2013 ICEEFP 3D Tracking Error Analyses_Darin Etherington from Christa Woodley

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0 2013 ICEEFP Salmon Passage Survival Through Bonnvilled Dam 2011_Gene Ploskey /slideshow/bonneville-salmon-passage-survival-2011-ploskey-2013-0625c/24389737 bonpassagesurvival2011ploskey2013-06-25c-130718105050-phpapp01
Chinook and Steelhead passage success through Bonneville dam. Monitored using PIT, JSATS ATM. 3D tracking.]]>
Chinook and Steelhead passage success through Bonneville dam. Monitored using PIT, JSATS ATM. 3D tracking.]]> Thu, 18 Jul 2013 10:50:50 GMT /slideshow/bonneville-salmon-passage-survival-2011-ploskey-2013-0625c/24389737 ChristaWoodley@slideshare.net(ChristaWoodley) 2013 ICEEFP Salmon Passage Survival Through Bonnvilled Dam 2011_Gene Ploskey ChristaWoodley Chinook and Steelhead passage success through Bonneville dam. Monitored using PIT, JSATS ATM. 3D tracking. <img style="border:1px solid #C3E6D8;float:right;" alt="" src="https://cdn.slidesharecdn.com/ss_thumbnails/bonpassagesurvival2011ploskey2013-06-25c-130718105050-phpapp01-thumbnail.jpg?width=120&height=120&fit=bounds" /> Chinook and Steelhead passage success through Bonneville dam. Monitored using PIT, JSATS ATM. 3D tracking.

2013 ICEEFP Salmon Passage Survival Through Bonnvilled Dam 2011_Gene Ploskey from Christa Woodley

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0 2013 ICEEFP Multi-year Database of Acoustic Monitoring (MyDam)_Jina Kim /ChristaWoodley/iceefp-session-c7-jina-kim-mydam-20130627 sessionc7kimmydam20130627-130715004644-phpapp02
A multi-year database of acoustic monitoring (MyDAM) is a relational database management system under development to facilitate metadata analyses by providing rapid access to data from all previous project and monitoring efforts. The MyDAM incorporates data from fixed and mobile hydroacoustic system used to monitor fish passage and behavior amongst the dams of lower Federal Columbia River Power System (FCRPS) since 1996. In addition, the Juvenile Salmonid Acoustic Telemetry System (JSATS) cabled array and autonomous node systems have gathered data in the FCRPS to better understand fish passage and provide survival estimates since 2004. Past hydroacoustics data have included dam operations, in-river routes of passage, fish behavior, passage densities and rates, as well as performance metrics. The JSATS data augments the aforementioned measures by providing individually-based data detailing the species and condition of the fish, their behavior, and their approach depth. The MyDAM has the capability to incorporate historical data and new data (i.e., environmental, operations, biological, acoustical data) with an intermediary quality control processing, and hierarchical user access. This presentation focuses on the development and needs of information management systems based on basin-wide acoustic telemetry monitoring to facilitate spatiotemporal meta-data analyses to support management of the FCRPS. Ultimately, the MyDAM provides the ability to perform long-term inquiry and trend analyses, develop risk-assessment models, forecast environmental conditions for fish passage and behavior under climate change and treaty agreements, as well as relate juvenile salmon to adult returns. ]]>
A multi-year database of acoustic monitoring (MyDAM) is a relational database management system under development to facilitate metadata analyses by providing rapid access to data from all previous project and monitoring efforts. The MyDAM incorporates data from fixed and mobile hydroacoustic system used to monitor fish passage and behavior amongst the dams of lower Federal Columbia River Power System (FCRPS) since 1996. In addition, the Juvenile Salmonid Acoustic Telemetry System (JSATS) cabled array and autonomous node systems have gathered data in the FCRPS to better understand fish passage and provide survival estimates since 2004. Past hydroacoustics data have included dam operations, in-river routes of passage, fish behavior, passage densities and rates, as well as performance metrics. The JSATS data augments the aforementioned measures by providing individually-based data detailing the species and condition of the fish, their behavior, and their approach depth. The MyDAM has the capability to incorporate historical data and new data (i.e., environmental, operations, biological, acoustical data) with an intermediary quality control processing, and hierarchical user access. This presentation focuses on the development and needs of information management systems based on basin-wide acoustic telemetry monitoring to facilitate spatiotemporal meta-data analyses to support management of the FCRPS. Ultimately, the MyDAM provides the ability to perform long-term inquiry and trend analyses, develop risk-assessment models, forecast environmental conditions for fish passage and behavior under climate change and treaty agreements, as well as relate juvenile salmon to adult returns. ]]> Mon, 15 Jul 2013 00:46:43 GMT /ChristaWoodley/iceefp-session-c7-jina-kim-mydam-20130627 ChristaWoodley@slideshare.net(ChristaWoodley) 2013 ICEEFP Multi-year Database of Acoustic Monitoring (MyDam)_Jina Kim ChristaWoodley A multi-year database of acoustic monitoring (MyDAM) is a relational database management system under development to facilitate metadata analyses by providing rapid access to data from all previous project and monitoring efforts. The MyDAM incorporates data from fixed and mobile hydroacoustic system used to monitor fish passage and behavior amongst the dams of lower Federal Columbia River Power System (FCRPS) since 1996. In addition, the Juvenile Salmonid Acoustic Telemetry System (JSATS) cabled array and autonomous node systems have gathered data in the FCRPS to better understand fish passage and provide survival estimates since 2004. Past hydroacoustics data have included dam operations, in-river routes of passage, fish behavior, passage densities and rates, as well as performance metrics. The JSATS data augments the aforementioned measures by providing individually-based data detailing the species and condition of the fish, their behavior, and their approach depth. The MyDAM has the capability to incorporate historical data and new data (i.e., environmental, operations, biological, acoustical data) with an intermediary quality control processing, and hierarchical user access. This presentation focuses on the development and needs of information management systems based on basin-wide acoustic telemetry monitoring to facilitate spatiotemporal meta-data analyses to support management of the FCRPS. Ultimately, the MyDAM provides the ability to perform long-term inquiry and trend analyses, develop risk-assessment models, forecast environmental conditions for fish passage and behavior under climate change and treaty agreements, as well as relate juvenile salmon to adult returns. <img style="border:1px solid #C3E6D8;float:right;" alt="" src="https://cdn.slidesharecdn.com/ss_thumbnails/sessionc7kimmydam20130627-130715004644-phpapp02-thumbnail.jpg?width=120&height=120&fit=bounds" /> A multi-year database of acoustic monitoring (MyDAM) is a relational database management system under development to facilitate metadata analyses by providing rapid access to data from all previous project and monitoring efforts. The MyDAM incorporates data from fixed and mobile hydroacoustic system used to monitor fish passage and behavior amongst the dams of lower Federal Columbia River Power System (FCRPS) since 1996. In addition, the Juvenile Salmonid Acoustic Telemetry System (JSATS) cabled array and autonomous node systems have gathered data in the FCRPS to better understand fish passage and provide survival estimates since 2004. Past hydroacoustics data have included dam operations, in-river routes of passage, fish behavior, passage densities and rates, as well as performance metrics. The JSATS data augments the aforementioned measures by providing individually-based data detailing the species and condition of the fish, their behavior, and their approach depth. The MyDAM has the capability to incorporate historical data and new data (i.e., environmental, operations, biological, acoustical data) with an intermediary quality control processing, and hierarchical user access. This presentation focuses on the development and needs of information management systems based on basin-wide acoustic telemetry monitoring to facilitate spatiotemporal meta-data analyses to support management of the FCRPS. Ultimately, the MyDAM provides the ability to perform long-term inquiry and trend analyses, develop risk-assessment models, forecast environmental conditions for fish passage and behavior under climate change and treaty agreements, as well as relate juvenile salmon to adult returns.

2013 ICEEFP Multi-year Database of Acoustic Monitoring (MyDam)_Jina Kim from Christa Woodley

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0 2013 ICEEFP Fisheries Information Management System (FIMS) at Petascale_Mark Weiland /slideshow/session-b7-petascalefimsmark-weiland20130627/24233332 sessionb7-petascale-fimsmarkweiland20130627-130715002816-phpapp01
Since 2004 the Juvenile Salmonid Acoustic Telemetry System (JSATS) cabled array and autonomous node systems have been deployed in the Columbia River Basin to provide survival estimates and understand fish passage. Autonomous nodes provide presence/absence while cabled arrays provide 3D fish position estimates. Cabled array deployments consist of over 100 acquisition systems continually collecting data through the juvenile salmonid migration season. Raw data volumes are approaching petabytes. Real-time software processing reduces decode acoustic micro transmitter (AMT) signals surgically implanted in juvenile salmonids. Given the distance between and number of systems, cellular modems notify a central monitoring system of potential system issues. Project management receives system alerts in efforts to proactively fix faulting equipment. System downtime and fish detections are coordinated with dam operations data, run at large estimates, environmental measurements, and fish condition data. Fish condition helps estimate the run of the river and is collected throughput the season. This data includes photographing each fish used in the study. In 2012, approximately 65,000 photographs were taken. Images are archived and used for reporting to management agencies. We present a fisheries information management system for large studies that can facilitate future spatiotemporal meta-data analysis to support management of hydropower systems. ]]>
Since 2004 the Juvenile Salmonid Acoustic Telemetry System (JSATS) cabled array and autonomous node systems have been deployed in the Columbia River Basin to provide survival estimates and understand fish passage. Autonomous nodes provide presence/absence while cabled arrays provide 3D fish position estimates. Cabled array deployments consist of over 100 acquisition systems continually collecting data through the juvenile salmonid migration season. Raw data volumes are approaching petabytes. Real-time software processing reduces decode acoustic micro transmitter (AMT) signals surgically implanted in juvenile salmonids. Given the distance between and number of systems, cellular modems notify a central monitoring system of potential system issues. Project management receives system alerts in efforts to proactively fix faulting equipment. System downtime and fish detections are coordinated with dam operations data, run at large estimates, environmental measurements, and fish condition data. Fish condition helps estimate the run of the river and is collected throughput the season. This data includes photographing each fish used in the study. In 2012, approximately 65,000 photographs were taken. Images are archived and used for reporting to management agencies. We present a fisheries information management system for large studies that can facilitate future spatiotemporal meta-data analysis to support management of hydropower systems. ]]> Mon, 15 Jul 2013 00:28:16 GMT /slideshow/session-b7-petascalefimsmark-weiland20130627/24233332 ChristaWoodley@slideshare.net(ChristaWoodley) 2013 ICEEFP Fisheries Information Management System (FIMS) at Petascale_Mark Weiland ChristaWoodley Since 2004 the Juvenile Salmonid Acoustic Telemetry System (JSATS) cabled array and autonomous node systems have been deployed in the Columbia River Basin to provide survival estimates and understand fish passage. Autonomous nodes provide presence/absence while cabled arrays provide 3D fish position estimates. Cabled array deployments consist of over 100 acquisition systems continually collecting data through the juvenile salmonid migration season. Raw data volumes are approaching petabytes. Real-time software processing reduces decode acoustic micro transmitter (AMT) signals surgically implanted in juvenile salmonids. Given the distance between and number of systems, cellular modems notify a central monitoring system of potential system issues. Project management receives system alerts in efforts to proactively fix faulting equipment. System downtime and fish detections are coordinated with dam operations data, run at large estimates, environmental measurements, and fish condition data. Fish condition helps estimate the run of the river and is collected throughput the season. This data includes photographing each fish used in the study. In 2012, approximately 65,000 photographs were taken. Images are archived and used for reporting to management agencies. We present a fisheries information management system for large studies that can facilitate future spatiotemporal meta-data analysis to support management of hydropower systems. <img style="border:1px solid #C3E6D8;float:right;" alt="" src="https://cdn.slidesharecdn.com/ss_thumbnails/sessionb7-petascale-fimsmarkweiland20130627-130715002816-phpapp01-thumbnail.jpg?width=120&height=120&fit=bounds" /> Since 2004 the Juvenile Salmonid Acoustic Telemetry System (JSATS) cabled array and autonomous node systems have been deployed in the Columbia River Basin to provide survival estimates and understand fish passage. Autonomous nodes provide presence/absence while cabled arrays provide 3D fish position estimates. Cabled array deployments consist of over 100 acquisition systems continually collecting data through the juvenile salmonid migration season. Raw data volumes are approaching petabytes. Real-time software processing reduces decode acoustic micro transmitter (AMT) signals surgically implanted in juvenile salmonids. Given the distance between and number of systems, cellular modems notify a central monitoring system of potential system issues. Project management receives system alerts in efforts to proactively fix faulting equipment. System downtime and fish detections are coordinated with dam operations data, run at large estimates, environmental measurements, and fish condition data. Fish condition helps estimate the run of the river and is collected throughput the season. This data includes photographing each fish used in the study. In 2012, approximately 65,000 photographs were taken. Images are archived and used for reporting to management agencies. We present a fisheries information management system for large studies that can facilitate future spatiotemporal meta-data analysis to support management of hydropower systems.

2013 ICEEFP Fisheries Information Management System (FIMS) at Petascale_Mark Weiland from Christa Woodley

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0 2013 ICEEFP FishSuite_Christa Woodley /slideshow/session-c7-fishsuitechristawoodley20130627/24233010 sessionc7fishsuitechristawoodley20130627-130715001615-phpapp02
FishSuite – Software for annotating, photographing, tracking, and reporting on physiological condition. FishSuite! has 5 platforms that expedite annotation, photographing, tracking, data entry, and reporting of biological data. The programs facilitate the documentation of fish physiological condition for several applications such as collection, tagging, and laboratory-based studies. FishBooth! documents the surgical procedures, effect of surgery including incisions and wound closing outcomes, external and internal condition, wound healing, and other activities. Since 2010, FishBooth! has catalogued over 120,000 photos of fish and surgical incisions. Fisheye! is an integrated recording system used to document thousands of injuries, maladies, and other meta-data that was subsequently stored in a relational database management system (RDBMS). FishNote! mines the FishBooth! image files for meta-data and the FishEye! RDBMS to merge and produce reports in .doc, .ppt, or .csv file format. In addition, FishNote! can query and integrate .csv P3 (PTAGIS) data. For holding and release activities, another set of programs, FishBucket! and FreeWilly!, can be used to identify and document the assigned tags implanted in the fish, assign a holding vessel, and track fish and vessels to release locations via GPS (including time and date). All applications are built to work independently or in concert with each other. ]]>
FishSuite – Software for annotating, photographing, tracking, and reporting on physiological condition. FishSuite! has 5 platforms that expedite annotation, photographing, tracking, data entry, and reporting of biological data. The programs facilitate the documentation of fish physiological condition for several applications such as collection, tagging, and laboratory-based studies. FishBooth! documents the surgical procedures, effect of surgery including incisions and wound closing outcomes, external and internal condition, wound healing, and other activities. Since 2010, FishBooth! has catalogued over 120,000 photos of fish and surgical incisions. Fisheye! is an integrated recording system used to document thousands of injuries, maladies, and other meta-data that was subsequently stored in a relational database management system (RDBMS). FishNote! mines the FishBooth! image files for meta-data and the FishEye! RDBMS to merge and produce reports in .doc, .ppt, or .csv file format. In addition, FishNote! can query and integrate .csv P3 (PTAGIS) data. For holding and release activities, another set of programs, FishBucket! and FreeWilly!, can be used to identify and document the assigned tags implanted in the fish, assign a holding vessel, and track fish and vessels to release locations via GPS (including time and date). All applications are built to work independently or in concert with each other. ]]> Mon, 15 Jul 2013 00:16:15 GMT /slideshow/session-c7-fishsuitechristawoodley20130627/24233010 ChristaWoodley@slideshare.net(ChristaWoodley) 2013 ICEEFP FishSuite_Christa Woodley ChristaWoodley FishSuite – Software for annotating, photographing, tracking, and reporting on physiological condition. FishSuite! has 5 platforms that expedite annotation, photographing, tracking, data entry, and reporting of biological data. The programs facilitate the documentation of fish physiological condition for several applications such as collection, tagging, and laboratory-based studies. FishBooth! documents the surgical procedures, effect of surgery including incisions and wound closing outcomes, external and internal condition, wound healing, and other activities. Since 2010, FishBooth! has catalogued over 120,000 photos of fish and surgical incisions. Fisheye! is an integrated recording system used to document thousands of injuries, maladies, and other meta-data that was subsequently stored in a relational database management system (RDBMS). FishNote! mines the FishBooth! image files for meta-data and the FishEye! RDBMS to merge and produce reports in .doc, .ppt, or .csv file format. In addition, FishNote! can query and integrate .csv P3 (PTAGIS) data. For holding and release activities, another set of programs, FishBucket! and FreeWilly!, can be used to identify and document the assigned tags implanted in the fish, assign a holding vessel, and track fish and vessels to release locations via GPS (including time and date). All applications are built to work independently or in concert with each other. <img style="border:1px solid #C3E6D8;float:right;" alt="" src="https://cdn.slidesharecdn.com/ss_thumbnails/sessionc7fishsuitechristawoodley20130627-130715001615-phpapp02-thumbnail.jpg?width=120&height=120&fit=bounds" /> FishSuite – Software for annotating, photographing, tracking, and reporting on physiological condition. FishSuite! has 5 platforms that expedite annotation, photographing, tracking, data entry, and reporting of biological data. The programs facilitate the documentation of fish physiological condition for several applications such as collection, tagging, and laboratory-based studies. FishBooth! documents the surgical procedures, effect of surgery including incisions and wound closing outcomes, external and internal condition, wound healing, and other activities. Since 2010, FishBooth! has catalogued over 120,000 photos of fish and surgical incisions. Fisheye! is an integrated recording system used to document thousands of injuries, maladies, and other meta-data that was subsequently stored in a relational database management system (RDBMS). FishNote! mines the FishBooth! image files for meta-data and the FishEye! RDBMS to merge and produce reports in .doc, .ppt, or .csv file format. In addition, FishNote! can query and integrate .csv P3 (PTAGIS) data. For holding and release activities, another set of programs, FishBucket! and FreeWilly!, can be used to identify and document the assigned tags implanted in the fish, assign a holding vessel, and track fish and vessels to release locations via GPS (including time and date). All applications are built to work independently or in concert with each other.

2013 ICEEFP FishSuite_Christa Woodley from Christa Woodley

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