�ݺ�ߣshows by User: IRIDA

�ݺ�ߣshows by User: IRIDA_community / http://www.slideshare.net/images/logo.gif �ݺ�ߣshows by User: IRIDA_community / Fri, 14 Oct 2016 21:59:52 GMT �ݺ�ߣShare feed for �ݺ�ߣshows by User: IRIDA_community Robertson immemxi final March 2016 /slideshow/robertson-immemxi-final-march-2016/67197460 robertsonimmemxifinal-161014215952
Utility Of The Salmonella In Sillico Typing Resource (SISTR) To Outbreak Investigations]]>
Utility Of The Salmonella In Sillico Typing Resource (SISTR) To Outbreak Investigations]]> Fri, 14 Oct 2016 21:59:52 GMT /slideshow/robertson-immemxi-final-march-2016/67197460 IRIDA_community@slideshare.net(IRIDA_community) Robertson immemxi final March 2016 IRIDA_community Utility Of The Salmonella In Sillico Typing Resource (SISTR) To Outbreak Investigations <img style="border:1px solid #C3E6D8;float:right;" alt="" src="https://cdn.slidesharecdn.com/ss_thumbnails/robertsonimmemxifinal-161014215952-thumbnail.jpg?width=120&height=120&fit=bounds" /> Utility Of The Salmonella In Sillico Typing Resource (SISTR) To Outbreak Investigations

Robertson immemxi final March 2016 from IRIDA_community

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0 Hetman immem xi final March 2016 /slideshow/hetman-immem-xi-final-march-2016/67197417 hetmanimmemxifinal-161014215729
The EpiQuant framework for assessing epidemiologic and genetic concordance: Towards improved use of genomic data in epidemiological applications.]]>
The EpiQuant framework for assessing epidemiologic and genetic concordance: Towards improved use of genomic data in epidemiological applications.]]> Fri, 14 Oct 2016 21:57:29 GMT /slideshow/hetman-immem-xi-final-march-2016/67197417 IRIDA_community@slideshare.net(IRIDA_community) Hetman immem xi final March 2016 IRIDA_community The EpiQuant framework for assessing epidemiologic and genetic concordance: Towards improved use of genomic data in epidemiological applications. <img style="border:1px solid #C3E6D8;float:right;" alt="" src="https://cdn.slidesharecdn.com/ss_thumbnails/hetmanimmemxifinal-161014215729-thumbnail.jpg?width=120&height=120&fit=bounds" /> The EpiQuant framework for assessing epidemiologic and genetic concordance: Towards improved use of genomic data in epidemiological applications.

Hetman immem xi final March 2016 from IRIDA_community

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0 Barker immemxi final March 2016 /slideshow/barker-immemxi-final-march-2016/67197378 barkerimmemxifinal-161014215449
Mitigating the effects of sequence data quality on strain typeability: towards the development of robust core genome MLST (cgMLST) schemes]]>
Mitigating the effects of sequence data quality on strain typeability: towards the development of robust core genome MLST (cgMLST) schemes]]> Fri, 14 Oct 2016 21:54:49 GMT /slideshow/barker-immemxi-final-march-2016/67197378 IRIDA_community@slideshare.net(IRIDA_community) Barker immemxi final March 2016 IRIDA_community Mitigating the effects of sequence data quality on strain typeability: towards the development of robust core genome MLST (cgMLST) schemes <img style="border:1px solid #C3E6D8;float:right;" alt="" src="https://cdn.slidesharecdn.com/ss_thumbnails/barkerimmemxifinal-161014215449-thumbnail.jpg?width=120&height=120&fit=bounds" /> Mitigating the effects of sequence data quality on strain typeability: towards the development of robust core genome MLST (cgMLST) schemes

Barker immemxi final March 2016 from IRIDA_community

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0 Emma FoodON poster3 /slideshow/emma-foodon-poster3/66877878 foodonposter3-161007231042
FoodON: A Global Farm-to-Fork Food Ontology]]>
FoodON: A Global Farm-to-Fork Food Ontology]]> Fri, 07 Oct 2016 23:10:42 GMT /slideshow/emma-foodon-poster3/66877878 IRIDA_community@slideshare.net(IRIDA_community) Emma FoodON poster3 IRIDA_community FoodON: A Global Farm-to-Fork Food Ontology <img style="border:1px solid #C3E6D8;float:right;" alt="" src="https://cdn.slidesharecdn.com/ss_thumbnails/foodonposter3-161007231042-thumbnail.jpg?width=120&height=120&fit=bounds" /> FoodON: A Global Farm-to-Fork Food Ontology

Emma FoodON poster3 from IRIDA_community

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0 Emma Food on workshop allergy_eg /slideshow/emma-food-on-workshop-allergyeg/66877767 foodonworkshopallergyeg-161007230412
FoodON Use Cases: Food Allergy ]]>
FoodON Use Cases: Food Allergy ]]> Fri, 07 Oct 2016 23:04:12 GMT /slideshow/emma-food-on-workshop-allergyeg/66877767 IRIDA_community@slideshare.net(IRIDA_community) Emma Food on workshop allergy_eg IRIDA_community FoodON Use Cases: Food Allergy <img style="border:1px solid #C3E6D8;float:right;" alt="" src="https://cdn.slidesharecdn.com/ss_thumbnails/foodonworkshopallergyeg-161007230412-thumbnail.jpg?width=120&height=120&fit=bounds" /> FoodON Use Cases: Food Allergy

Emma Food on workshop allergy_eg from IRIDA_community

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0 Biocuration gen epio_poster /IRIDA_community/biocuration-gen-epioposter biocurationgenepioposter-161007225048
GenEpiO: The Genomic Epidemiology Application Ontology for the Standardization and Integration of Microbial Genomic, Clinical and Epidemiological Data]]>
GenEpiO: The Genomic Epidemiology Application Ontology for the Standardization and Integration of Microbial Genomic, Clinical and Epidemiological Data]]> Fri, 07 Oct 2016 22:50:48 GMT /IRIDA_community/biocuration-gen-epioposter IRIDA_community@slideshare.net(IRIDA_community) Biocuration gen epio_poster IRIDA_community GenEpiO: The Genomic Epidemiology Application Ontology for the Standardization and Integration of Microbial Genomic, Clinical and Epidemiological Data <img style="border:1px solid #C3E6D8;float:right;" alt="" src="https://cdn.slidesharecdn.com/ss_thumbnails/biocurationgenepioposter-161007225048-thumbnail.jpg?width=120&height=120&fit=bounds" /> GenEpiO: The Genomic Epidemiology Application Ontology for the Standardization and Integration of Microbial Genomic, Clinical and Epidemiological Data

Biocuration gen epio_poster from IRIDA_community

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0 Emma Griffiths ASM microbe gen_epio_poster /IRIDA_community/emma-griffiths-asm-microbe-genepioposter asmmicrobegenepioposter-161007224652
GenEpiO: The Genomic Epidemiology Application Ontology for Standardization and Integration of Microbial Genomic, Clinical and Epidemiological Data]]>
GenEpiO: The Genomic Epidemiology Application Ontology for Standardization and Integration of Microbial Genomic, Clinical and Epidemiological Data]]> Fri, 07 Oct 2016 22:46:52 GMT /IRIDA_community/emma-griffiths-asm-microbe-genepioposter IRIDA_community@slideshare.net(IRIDA_community) Emma Griffiths ASM microbe gen_epio_poster IRIDA_community GenEpiO: The Genomic Epidemiology Application Ontology for Standardization and Integration of Microbial Genomic, Clinical and Epidemiological Data <img style="border:1px solid #C3E6D8;float:right;" alt="" src="https://cdn.slidesharecdn.com/ss_thumbnails/asmmicrobegenepioposter-161007224652-thumbnail.jpg?width=120&height=120&fit=bounds" /> GenEpiO: The Genomic Epidemiology Application Ontology for Standardization and Integration of Microbial Genomic, Clinical and Epidemiological Data

Emma Griffiths ASM microbe gen_epio_poster from IRIDA_community

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0 Julie Shay CCBC poster may 11 2016 /slideshow/julie-shay-ccbc-poster-may-11-2016/66876491 shayccbcpostermay11-161007220344
The utility of draft bacterial genomes for gene function analysis and genomic island prediction]]>
The utility of draft bacterial genomes for gene function analysis and genomic island prediction]]> Fri, 07 Oct 2016 22:03:44 GMT /slideshow/julie-shay-ccbc-poster-may-11-2016/66876491 IRIDA_community@slideshare.net(IRIDA_community) Julie Shay CCBC poster may 11 2016 IRIDA_community The utility of draft bacterial genomes for gene function analysis and genomic island prediction <img style="border:1px solid #C3E6D8;float:right;" alt="" src="https://cdn.slidesharecdn.com/ss_thumbnails/shayccbcpostermay11-161007220344-thumbnail.jpg?width=120&height=120&fit=bounds" /> The utility of draft bacterial genomes for gene function analysis and genomic island prediction

Julie Shay CCBC poster may 11 2016 from IRIDA_community

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0 Integrate Ontologies into your apps /slideshow/integrate-ontologies-into-your-apps/62782192 ontologize-160606190127
Introducing OWL Ontologies - the use of globally accessible controlled vocabularies in the domain of biology, chemistry, health, and data science. The more that data elements and form fields reference these, the more your application and data will become globally connected and adaptable.]]>
Introducing OWL Ontologies - the use of globally accessible controlled vocabularies in the domain of biology, chemistry, health, and data science. The more that data elements and form fields reference these, the more your application and data will become globally connected and adaptable.]]> Mon, 06 Jun 2016 19:01:27 GMT /slideshow/integrate-ontologies-into-your-apps/62782192 IRIDA_community@slideshare.net(IRIDA_community) Integrate Ontologies into your apps IRIDA_community Introducing OWL Ontologies - the use of globally accessible controlled vocabularies in the domain of biology, chemistry, health, and data science. The more that data elements and form fields reference these, the more your application and data will become globally connected and adaptable. <img style="border:1px solid #C3E6D8;float:right;" alt="" src="https://cdn.slidesharecdn.com/ss_thumbnails/ontologize-160606190127-thumbnail.jpg?width=120&height=120&fit=bounds" /> Introducing OWL Ontologies - the use of globally accessible controlled vocabularies in the domain of biology, chemistry, health, and data science. The more that data elements and form fields reference these, the more your application and data will become globally connected and adaptable.

Integrate Ontologies into your apps from IRIDA_community

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0 Report Calc for Quality Control /slideshow/report-calc-for-quality-control-61213397/61213397 rcqcposterdraft-160421232608
Report Calc for Quality Control (RCQC) is an interpreter for the RCQC scripting language for text-mining log and data files to create reports and to control workflow within a workflow engine. It works as a python command line tool and also as a Galaxy bioinformatics platform tool. We're building a library of simple "recipe" scripts that extract quality control (QC) data from various reports like FastQC, QUAST, CheckM and SPAdes into a common JSON data format. By placing the RCQC app in your workflow downstream from one of these apps, you can convert their textual or tabular data into a much more standardized and software-friendly format.]]>
Report Calc for Quality Control (RCQC) is an interpreter for the RCQC scripting language for text-mining log and data files to create reports and to control workflow within a workflow engine. It works as a python command line tool and also as a Galaxy bioinformatics platform tool. We're building a library of simple "recipe" scripts that extract quality control (QC) data from various reports like FastQC, QUAST, CheckM and SPAdes into a common JSON data format. By placing the RCQC app in your workflow downstream from one of these apps, you can convert their textual or tabular data into a much more standardized and software-friendly format.]]> Thu, 21 Apr 2016 23:26:08 GMT /slideshow/report-calc-for-quality-control-61213397/61213397 IRIDA_community@slideshare.net(IRIDA_community) Report Calc for Quality Control IRIDA_community Report Calc for Quality Control (RCQC) is an interpreter for the RCQC scripting language for text-mining log and data files to create reports and to control workflow within a workflow engine. It works as a python command line tool and also as a Galaxy bioinformatics platform tool. We're building a library of simple "recipe" scripts that extract quality control (QC) data from various reports like FastQC, QUAST, CheckM and SPAdes into a common JSON data format. By placing the RCQC app in your workflow downstream from one of these apps, you can convert their textual or tabular data into a much more standardized and software-friendly format. <img style="border:1px solid #C3E6D8;float:right;" alt="" src="https://cdn.slidesharecdn.com/ss_thumbnails/rcqcposterdraft-160421232608-thumbnail.jpg?width=120&height=120&fit=bounds" /> Report Calc for Quality Control (RCQC) is an interpreter for the RCQC scripting language for text-mining log and data files to create reports and to control workflow within a workflow engine. It works as a python command line tool and also as a Galaxy bioinformatics platform tool. We're building a library of simple "recipe" scripts that extract quality control (QC) data from various reports like FastQC, QUAST, CheckM and SPAdes into a common JSON data format. By placing the RCQC app in your workflow downstream from one of these apps, you can convert their textual or tabular data into a much more standardized and software-friendly format.

Report Calc for Quality Control from IRIDA_community

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0 Irida immemxi hsiao /slideshow/irida-immemxi-hsiao/60243868 iridaimmemxihsiao-160330210220
IRIDA: Canada’s federated platform for genomic epidemiology]]>
IRIDA: Canada’s federated platform for genomic epidemiology]]> Wed, 30 Mar 2016 21:02:19 GMT /slideshow/irida-immemxi-hsiao/60243868 IRIDA_community@slideshare.net(IRIDA_community) Irida immemxi hsiao IRIDA_community IRIDA: Canada’s federated platform for genomic epidemiology <img style="border:1px solid #C3E6D8;float:right;" alt="" src="https://cdn.slidesharecdn.com/ss_thumbnails/iridaimmemxihsiao-160330210220-thumbnail.jpg?width=120&height=120&fit=bounds" /> IRIDA: Canada’s federated platform for genomic epidemiology

Irida immemxi hsiao from IRIDA_community

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0 Gen epio immem_griffiths /slideshow/gen-epio-immemgriffiths/60243436 genepioimmemgriffiths-160330204934
IRIDA’s Genomic Epidemiology Application Ontology (GenEpiO): Genomic, Clinical and Epidemiological Data Standardization and Integration ]]>
IRIDA’s Genomic Epidemiology Application Ontology (GenEpiO): Genomic, Clinical and Epidemiological Data Standardization and Integration ]]> Wed, 30 Mar 2016 20:49:34 GMT /slideshow/gen-epio-immemgriffiths/60243436 IRIDA_community@slideshare.net(IRIDA_community) Gen epio immem_griffiths IRIDA_community IRIDA’s Genomic Epidemiology Application Ontology (GenEpiO): Genomic, Clinical and Epidemiological Data Standardization and Integration <img style="border:1px solid #C3E6D8;float:right;" alt="" src="https://cdn.slidesharecdn.com/ss_thumbnails/genepioimmemgriffiths-160330204934-thumbnail.jpg?width=120&height=120&fit=bounds" /> IRIDA’s Genomic Epidemiology Application Ontology (GenEpiO): Genomic, Clinical and Epidemiological Data Standardization and Integration

Gen epio immem_griffiths from IRIDA_community

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0 Irida bccdc dec10_2015 /slideshow/irida-bccdc-dec102015/57751297 dfvqvkd6qqeps2ts85yg-signature-8b8584bf5e02593bd7db890ffc05d992042e2572ac115aba702cc969818d6774-poli-160201200402
Will BCCDC presentation ]]>
Will BCCDC presentation ]]> Mon, 01 Feb 2016 20:04:02 GMT /slideshow/irida-bccdc-dec102015/57751297 IRIDA_community@slideshare.net(IRIDA_community) Irida bccdc dec10_2015 IRIDA_community Will BCCDC presentation <img style="border:1px solid #C3E6D8;float:right;" alt="" src="https://cdn.slidesharecdn.com/ss_thumbnails/dfvqvkd6qqeps2ts85yg-signature-8b8584bf5e02593bd7db890ffc05d992042e2572ac115aba702cc969818d6774-poli-160201200402-thumbnail.jpg?width=120&height=120&fit=bounds" /> Will BCCDC presentation

Irida bccdc dec10_2015 from IRIDA_community

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0 Grand round whsiao_may2015 /slideshow/grand-round-whsiaomay2015/57750146 c15gtv0nsosxueqniu7c-signature-68218fc2e4ba00d8a6392d04c46b5765efc6aa70634f0ee15fd5f6a6fe1fa8ed-poli-160201193724
Will Hsiao BCCDC Grand Rounds talk: How can we make genomic epidemiology a widespread reality?]]>
Will Hsiao BCCDC Grand Rounds talk: How can we make genomic epidemiology a widespread reality?]]> Mon, 01 Feb 2016 19:37:23 GMT /slideshow/grand-round-whsiaomay2015/57750146 IRIDA_community@slideshare.net(IRIDA_community) Grand round whsiao_may2015 IRIDA_community Will Hsiao BCCDC Grand Rounds talk: How can we make genomic epidemiology a widespread reality? <img style="border:1px solid #C3E6D8;float:right;" alt="" src="https://cdn.slidesharecdn.com/ss_thumbnails/c15gtv0nsosxueqniu7c-signature-68218fc2e4ba00d8a6392d04c46b5765efc6aa70634f0ee15fd5f6a6fe1fa8ed-poli-160201193724-thumbnail.jpg?width=120&height=120&fit=bounds" /> Will Hsiao BCCDC Grand Rounds talk: How can we make genomic epidemiology a widespread reality?

Grand round whsiao_may2015 from IRIDA_community

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0 IRIDA: Canada’s federated platform for genomic epidemiology, ABPHM 2015 WHsiao /slideshow/irida-canadas-federated-platform-for-genomic-epidemiology-abphm-2015-whsiao/57387846 abphm2015whsiao-160122203418
IRIDA: Canada’s federated platform for genomic epidemiology]]>
IRIDA: Canada’s federated platform for genomic epidemiology]]> Fri, 22 Jan 2016 20:34:18 GMT /slideshow/irida-canadas-federated-platform-for-genomic-epidemiology-abphm-2015-whsiao/57387846 IRIDA_community@slideshare.net(IRIDA_community) IRIDA: Canada’s federated platform for genomic epidemiology, ABPHM 2015 WHsiao IRIDA_community IRIDA: Canada’s federated platform for genomic epidemiology <img style="border:1px solid #C3E6D8;float:right;" alt="" src="https://cdn.slidesharecdn.com/ss_thumbnails/abphm2015whsiao-160122203418-thumbnail.jpg?width=120&height=120&fit=bounds" /> IRIDA: Canada’s federated platform for genomic epidemiology

IRIDA: Canada’s federated platform for genomic epidemiology, ABPHM 2015 WHsiao from IRIDA_community

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0 Domselaar GMI8 Beijing Canadian WGS Surveillance Experience /slideshow/domselaar-gmi8-beijing-canadian-wgs-surveillance-experience/57387500 vandomselaargmi8beijing-canadianwgssurveillanceexperience-160122202354
The use of WGS data for surveillance systems: the Canadian experience. ]]>
The use of WGS data for surveillance systems: the Canadian experience. ]]> Fri, 22 Jan 2016 20:23:54 GMT /slideshow/domselaar-gmi8-beijing-canadian-wgs-surveillance-experience/57387500 IRIDA_community@slideshare.net(IRIDA_community) Domselaar GMI8 Beijing Canadian WGS Surveillance Experience IRIDA_community The use of WGS data for surveillance systems: the Canadian experience. <img style="border:1px solid #C3E6D8;float:right;" alt="" src="https://cdn.slidesharecdn.com/ss_thumbnails/vandomselaargmi8beijing-canadianwgssurveillanceexperience-160122202354-thumbnail.jpg?width=120&height=120&fit=bounds" /> The use of WGS data for surveillance systems: the Canadian experience.

Domselaar GMI8 Beijing Canadian WGS Surveillance Experience from IRIDA_community

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0 https://public.slidesharecdn.com/v2/images/profile-picture.png https://cdn.slidesharecdn.com/ss_thumbnails/robertsonimmemxifinal-161014215952-thumbnail.jpg?width=320&height=320&fit=bounds slideshow/robertson-immemxi-final-march-2016/67197460 Robertson immemxi fina... https://cdn.slidesharecdn.com/ss_thumbnails/hetmanimmemxifinal-161014215729-thumbnail.jpg?width=320&height=320&fit=bounds slideshow/hetman-immem-xi-final-march-2016/67197417 Hetman immem xi final ... https://cdn.slidesharecdn.com/ss_thumbnails/barkerimmemxifinal-161014215449-thumbnail.jpg?width=320&height=320&fit=bounds slideshow/barker-immemxi-final-march-2016/67197378 Barker immemxi final M...