際際滷shows by User: TimothyDanford / http://www.slideshare.net/images/logo.gif 際際滷shows by User: TimothyDanford / Tue, 06 Oct 2015 16:19:45 GMT 際際滷Share feed for 際際滷shows by User: TimothyDanford Strata-Hadoop 2015 Presentation /slideshow/stratahadoop-2015-presentation/53607225 tdanford-strata-2015-151006161946-lva1-app6892
Presentation from Strata-Hadoop 2015 (http://strataconf.com/big-data-conference-ny-2015/public/schedule/speaker/197575) -- a brief introduction to genomics followed by an overview of approaches to bioinformatics coding using Spark. Pretty high-level.]]>
Presentation from Strata-Hadoop 2015 (http://strataconf.com/big-data-conference-ny-2015/public/schedule/speaker/197575) -- a brief introduction to genomics followed by an overview of approaches to bioinformatics coding using Spark. Pretty high-level.]]> Tue, 06 Oct 2015 16:19:45 GMT /slideshow/stratahadoop-2015-presentation/53607225 TimothyDanford@slideshare.net(TimothyDanford) Strata-Hadoop 2015 Presentation TimothyDanford Presentation from Strata-Hadoop 2015 (http://strataconf.com/big-data-conference-ny-2015/public/schedule/speaker/197575) -- a brief introduction to genomics followed by an overview of approaches to bioinformatics coding using Spark. Pretty high-level. <img style="border:1px solid #C3E6D8;float:right;" alt="" src="https://cdn.slidesharecdn.com/ss_thumbnails/tdanford-strata-2015-151006161946-lva1-app6892-thumbnail.jpg?width=120&amp;height=120&amp;fit=bounds" /><br> Presentation from Strata-Hadoop 2015 (http://strataconf.com/big-data-conference-ny-2015/public/schedule/speaker/197575) -- a brief introduction to genomics followed by an overview of approaches to bioinformatics coding using Spark. Pretty high-level.
Strata-Hadoop 2015 Presentation from Timothy Danford
]]> 1646 9 https://cdn.slidesharecdn.com/ss_thumbnails/tdanford-strata-2015-151006161946-lva1-app6892-thumbnail.jpg?width=120&height=120&fit=bounds presentation Black http://activitystrea.ms/schema/1.0/post http://activitystrea.ms/schema/1.0/posted 0 Spark Summit East 2015 /slideshow/spark-summit-east-2015/46681635 danford-sparksummit2015-150406083305-conversion-gate01
際際滷s presented at the Spark Summit East 2015 (http://spark-summit.org/east). Video should be available through their site, at some point in the future. (Some of these slides were adapted from an earlier talk "Why is Bioinformatics a Good Fit for Spark?", given to a Spark meetup audience.)]]>
際際滷s presented at the Spark Summit East 2015 (http://spark-summit.org/east). Video should be available through their site, at some point in the future. (Some of these slides were adapted from an earlier talk "Why is Bioinformatics a Good Fit for Spark?", given to a Spark meetup audience.)]]> Mon, 06 Apr 2015 08:33:04 GMT /slideshow/spark-summit-east-2015/46681635 TimothyDanford@slideshare.net(TimothyDanford) Spark Summit East 2015 TimothyDanford 際際滷s presented at the Spark Summit East 2015 (http://spark-summit.org/east). Video should be available through their site, at some point in the future. (Some of these slides were adapted from an earlier talk "Why is Bioinformatics a Good Fit for Spark?", given to a Spark meetup audience.) <img style="border:1px solid #C3E6D8;float:right;" alt="" src="https://cdn.slidesharecdn.com/ss_thumbnails/danford-sparksummit2015-150406083305-conversion-gate01-thumbnail.jpg?width=120&amp;height=120&amp;fit=bounds" /><br> 際際滷s presented at the Spark Summit East 2015 (http://spark-summit.org/east). Video should be available through their site, at some point in the future. (Some of these slides were adapted from an earlier talk &quot;Why is Bioinformatics a Good Fit for Spark?&quot;, given to a Spark meetup audience.)
Spark Summit East 2015 from Timothy Danford
]]> 671 2 https://cdn.slidesharecdn.com/ss_thumbnails/danford-sparksummit2015-150406083305-conversion-gate01-thumbnail.jpg?width=120&height=120&fit=bounds presentation Black http://activitystrea.ms/schema/1.0/post http://activitystrea.ms/schema/1.0/posted 0 Why is Bioinformatics a Good Fit for Spark? /slideshow/tdanford-spark/40586557 tdanford-spark-141022054154-conversion-gate02
DNA sequencing is producing a wave of data which will change the way that drugs are developed, patients diagnosed, and our understanding of human biology. To fulfill this promise, however, the tools for interpretation and analysis must scale to match the quantity and diversity of "big data genomics." ADAM is an open-source genomics processing engine, built using Spark, Apache Avro, and Parquet. This talk will discuss some of the advantages that the Spark platform brings to genomics, the benefits of using technologies like Parquet in conjunction with Spark, and the challenges of adapting new technologies for existing tools in bioinformatics. These are slides for a talk given at the Apache Spark Meetup in Boston on October 20, 2014.]]>
DNA sequencing is producing a wave of data which will change the way that drugs are developed, patients diagnosed, and our understanding of human biology. To fulfill this promise, however, the tools for interpretation and analysis must scale to match the quantity and diversity of "big data genomics." ADAM is an open-source genomics processing engine, built using Spark, Apache Avro, and Parquet. This talk will discuss some of the advantages that the Spark platform brings to genomics, the benefits of using technologies like Parquet in conjunction with Spark, and the challenges of adapting new technologies for existing tools in bioinformatics. These are slides for a talk given at the Apache Spark Meetup in Boston on October 20, 2014.]]> Wed, 22 Oct 2014 05:41:54 GMT /slideshow/tdanford-spark/40586557 TimothyDanford@slideshare.net(TimothyDanford) Why is Bioinformatics a Good Fit for Spark? TimothyDanford DNA sequencing is producing a wave of data which will change the way that drugs are developed, patients diagnosed, and our understanding of human biology. To fulfill this promise, however, the tools for interpretation and analysis must scale to match the quantity and diversity of "big data genomics." ADAM is an open-source genomics processing engine, built using Spark, Apache Avro, and Parquet. This talk will discuss some of the advantages that the Spark platform brings to genomics, the benefits of using technologies like Parquet in conjunction with Spark, and the challenges of adapting new technologies for existing tools in bioinformatics. These are slides for a talk given at the Apache Spark Meetup in Boston on October 20, 2014. <img style="border:1px solid #C3E6D8;float:right;" alt="" src="https://cdn.slidesharecdn.com/ss_thumbnails/tdanford-spark-141022054154-conversion-gate02-thumbnail.jpg?width=120&amp;height=120&amp;fit=bounds" /><br> DNA sequencing is producing a wave of data which will change the way that drugs are developed, patients diagnosed, and our understanding of human biology. To fulfill this promise, however, the tools for interpretation and analysis must scale to match the quantity and diversity of &quot;big data genomics.&quot; ADAM is an open-source genomics processing engine, built using Spark, Apache Avro, and Parquet. This talk will discuss some of the advantages that the Spark platform brings to genomics, the benefits of using technologies like Parquet in conjunction with Spark, and the challenges of adapting new technologies for existing tools in bioinformatics. These are slides for a talk given at the Apache Spark Meetup in Boston on October 20, 2014.
Why is Bioinformatics a Good Fit for Spark? from Timothy Danford
]]> 4483 5 https://cdn.slidesharecdn.com/ss_thumbnails/tdanford-spark-141022054154-conversion-gate02-thumbnail.jpg?width=120&height=120&fit=bounds presentation Black http://activitystrea.ms/schema/1.0/post http://activitystrea.ms/schema/1.0/posted 0 https://cdn.slidesharecdn.com/profile-photo-TimothyDanford-48x48.jpg?cb=1523706223 https://cdn.slidesharecdn.com/ss_thumbnails/tdanford-strata-2015-151006161946-lva1-app6892-thumbnail.jpg?width=320&height=320&fit=bounds slideshow/stratahadoop-2015-presentation/53607225 Strata-Hadoop 2015 Pre... https://cdn.slidesharecdn.com/ss_thumbnails/danford-sparksummit2015-150406083305-conversion-gate01-thumbnail.jpg?width=320&height=320&fit=bounds slideshow/spark-summit-east-2015/46681635 Spark Summit East 2015 https://cdn.slidesharecdn.com/ss_thumbnails/tdanford-spark-141022054154-conversion-gate02-thumbnail.jpg?width=320&height=320&fit=bounds slideshow/tdanford-spark/40586557 Why is Bioinformatics ...