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Antibodies: Structure And
Function
 Glycoprotein molecules that are produced by plasma cells in
response to an immunogen and which function as antibodies.
 Antibodies belong to a class of proteins called
immunoglobulins
 Immunoglobulins are Y shaped proteins. Thearms of the
Y bind antigens. The tail of the Y is responsible for
biological activity
Immune serum
Ag adsorbed serum

1

2
 
+ -
albumin
globulins
Mobility
Amountofprotein
General Functions of Immunoglobulins
 Ag binding
 Can result in protection
 Valency
 Effector functions
 Fixation of complement
 Binding to various cells
 Usually requires Ag binding
Basic Immunoglobulin Structure
 Immunoglobulins - heterogeneous
 Myeloma proteins - homogeneous
immunoglobulins
Antibody Structure
 Antibodies Are Made Up Of:
 2 Light Chains (identical) ~25 KDa
 2 Heavy Chains (identical) ~50 KDa
 Each Light Chain Bound To Heavy Chain By Disulfide
(H-L)
 Heavy Chain Bound to Heavy Chain (H-H)
 First 100 a/a Of Amino Terminal Vary of Both H and L
Chain Are Variable
 Referred To As VL , VH, CH And CL
 CDR (Complementary Determining Regions) Are What
Bind Ag
 Remaining Regions Are Very Similar Within Same
Class
Imunoglobulins-Basics
 Repeating Domains of ~110 a/a
 Intrachain disulfide bonds within each domain
 Heavy chains
 1 VH and either 3 or 4 CH (CH1, CH2, CH3, CH4)
 Light chains
 1 VL and 1 CL
 Hinge Region
 Rich in proline residues (flexible)
 Hinge found in IgG, IgA and IgD
 Proline residues are target for proteolytic digestion (papain and
pepsin)
 Rich in cysteine residues (disulfide bonds)
 IgM and IgE lack hinge region
 They instead have extra CH4 Domain
Antibody Structure
Imunoglobulins-Basics
 Digestion With Papain Yields
 3 Fragments
 2 identical Fab and 1 Fc
 Fab Because Fragment That is Antigen Binding
 Fc Because Found To Crystallize In Cold Storage
 Pepsin Digestion
 F(ab`)2
 No Fc Recovery, Digested Entirely
 Mercaptoethanol Reduction (Eliminates Disulfide Bonds)
And Alkylation Showed
Enzymatic Digestion Of Antibodies
Imunoglobulins-Basics
 Sequencing Of Several Immunoglobulins Revealed
 100-110 Amino Terminus, Highly Variable (V)
 Five Basic Sequence Patterns
 , , , , 
 IgA, IgD, IgG, IgE and IgM
 The Above Classes Are Called Isotype
 Each class can have either  or  light chains
 Minor differences Led To Sub-classes For IgA and IgG
 IgA1, IgGA2 and IgG1, IgG2, IgG3, IgG4
Sequencing Of Heavy Chains
Characteristics of hinge region
Immunoglobulins (with possible exception of IgM & IgE)
contain hinge between
 CH1 & CH2
No homology between AA sequence of hinge & heavy chains
AA sequence differs with different classes
Comprised of many cysteine and proline residues
Cysteine involved in formation of interchain disulfide bonds
Proline prevents folding in a globular structure, allowing
flexibility between
two Fab arms of the Y-shaped antibody; allows open & close to
accommodate
binding to two epitopes; because it is open, it can be cleaved by
proteases
(e.g. papain) to generate the Fab & Fc fragments
Immunoglobulin Fragments:
Structure/Function Relationships
 Fab
 Ag binding
 Fc
 Effector functions
 F(ab)2
Pepsin
Fc
Peptides
F(ab)2
Immunoglobulin Fragments:
Structure/Function Relationships
 Fab
 Ag binding
 Valence = 1
 Specificty
determined by VH
and VL
Papain
Fc
Fab
Fc
Effector functions
Immunoglobulin Fragments:
Structure/Function Relationships
Ag Binding
Complement Binding Site
Placental Transfer
Binding to Fc
Receptors
IgG
IgG1 IgG2
IgG3 IgG4
Subclasses show close overall relation
Heavy chains = 1,2,3,4
Highest concentration in serum
Plays major role in immune dfns.
Small size ppt in surfaces
(e.g. cross placental barrier)
All normal indiv. have all
IgG1>IgG2>IgG3>IgG4
IgG3 has shortest 1/2 life,
highest catabolic rate,
highest # S-S
IgG4 = monoval. no aggl
ppt rx., autoab to clot fac
Autoab to DNA = IgG1,IgG3
Two  H chains, Two L chains
(either  or  but not both)
Each H chain = 50 kD
Each L chain = 25 kD
MW approx. 150 kD, 7S,  globulin
IgG
 Structure
 Monomer (7S)
IgG1, IgG2 and IgG4 IgG3
IgG
 Structure
 Properties
 Major serum Ig
 Major Ig in extravascular spaces
 The only antibody to cross the placental
 Fixes complement
 Binds to Fc receptors
 Phagocytes - opsonization
 NK cells  ADCC
 Binds to SPA
IgM
 Structure
 Properties
 3rd highest serum Ig
 First Ig made by fetus and B
cells
 Produced early in the
primary response
 The most efficient Ig
 Fixes complement
Tail
Piece
Agglutinating Ig
Binds to Fc receptors
B cell surface Ig
IgM
 Structure
 Pentamer (19S)
composed 5
H2L2 units plus one
molecule of
J chain
 Extra domain (CH4)
 J chain
CH4
J Chain
Structural features of IgM
Pentamer (5)
First Ig produced following immun.
Macroglobulin (M)
900 kD, 19S
SSS S
SS
J chain Doesnt have hinge region
has additional H domain
Has a J chain (one of 2 Ig isotypes)
15 kD
IgD
 Structure
 Monomer
 Tail piece
Tail Piece
IgD
 Structure
 Properties
 4th highest serum Ig
 B cell surface Ig
 Does not bind complement
Structural features of IgD
Primarily a B cell antigen receptor
Long exposed hinge region
170kD, 7S, migrates as fast 
No interchain S-S bridges in H chains
Readily denatured
Imunoglobulins-Basics
IgA
 Properties
2nd highest serum Ig
Major secretory Ig ( saliva, tears,
respiratory, intestinal, and genital
tract secretions.)
Does not fix complement unless
aggregated
Binds to Fc receptors on some cells
IgA
 Structure
Serum - monomer
Secretions (sIgA)
Dimer (11S), sIgA molecule consists of two
H2L2 units plus one molecule each of J chain
and secretory component(SC or SP)
J ChainSecretory Piece
IgE
 Structure
 Monomer
 Extra domain (CH4)
CH4
Structural features of IgE
Sometimes called reaginic ag
Mediates allergies (Type I
hypersensitivies)
190 kDa, 8S, migrates as fast 
Contains an extra domain (CH4)
which binds to mast cells
& basophils
May remain attached for long time
when ag reappears, cross links
IgE on mast cell surface, release
mast-cell granules & signs of
anaphylaxis
IgE
 Structure
 Properties
 Least common serum Ig
 Allergic reactions
 Parasitic infections
 Does not fix complement
Fixation of C1 by IgG and IgM Abs
No activation Activation
B Cell Antigen Receptor (BcR)
Ig-Ig- Ig-Ig-
L & H chain folding to yield 3 CDR in each
chain to form walls of ag binding groove

More Related Content

Imunoglobulins-Basics

  • 2. Glycoprotein molecules that are produced by plasma cells in response to an immunogen and which function as antibodies. Antibodies belong to a class of proteins called immunoglobulins Immunoglobulins are Y shaped proteins. Thearms of the Y bind antigens. The tail of the Y is responsible for biological activity Immune serum Ag adsorbed serum 1 2 + - albumin globulins Mobility Amountofprotein
  • 3. General Functions of Immunoglobulins Ag binding Can result in protection Valency Effector functions Fixation of complement Binding to various cells Usually requires Ag binding
  • 4. Basic Immunoglobulin Structure Immunoglobulins - heterogeneous Myeloma proteins - homogeneous immunoglobulins
  • 5. Antibody Structure Antibodies Are Made Up Of: 2 Light Chains (identical) ~25 KDa 2 Heavy Chains (identical) ~50 KDa Each Light Chain Bound To Heavy Chain By Disulfide (H-L) Heavy Chain Bound to Heavy Chain (H-H) First 100 a/a Of Amino Terminal Vary of Both H and L Chain Are Variable Referred To As VL , VH, CH And CL CDR (Complementary Determining Regions) Are What Bind Ag Remaining Regions Are Very Similar Within Same Class
  • 7. Repeating Domains of ~110 a/a Intrachain disulfide bonds within each domain Heavy chains 1 VH and either 3 or 4 CH (CH1, CH2, CH3, CH4) Light chains 1 VL and 1 CL Hinge Region Rich in proline residues (flexible) Hinge found in IgG, IgA and IgD Proline residues are target for proteolytic digestion (papain and pepsin) Rich in cysteine residues (disulfide bonds) IgM and IgE lack hinge region They instead have extra CH4 Domain Antibody Structure
  • 9. Digestion With Papain Yields 3 Fragments 2 identical Fab and 1 Fc Fab Because Fragment That is Antigen Binding Fc Because Found To Crystallize In Cold Storage Pepsin Digestion F(ab`)2 No Fc Recovery, Digested Entirely Mercaptoethanol Reduction (Eliminates Disulfide Bonds) And Alkylation Showed Enzymatic Digestion Of Antibodies
  • 11. Sequencing Of Several Immunoglobulins Revealed 100-110 Amino Terminus, Highly Variable (V) Five Basic Sequence Patterns , , , , IgA, IgD, IgG, IgE and IgM The Above Classes Are Called Isotype Each class can have either or light chains Minor differences Led To Sub-classes For IgA and IgG IgA1, IgGA2 and IgG1, IgG2, IgG3, IgG4 Sequencing Of Heavy Chains
  • 12. Characteristics of hinge region Immunoglobulins (with possible exception of IgM & IgE) contain hinge between CH1 & CH2 No homology between AA sequence of hinge & heavy chains AA sequence differs with different classes Comprised of many cysteine and proline residues Cysteine involved in formation of interchain disulfide bonds Proline prevents folding in a globular structure, allowing flexibility between two Fab arms of the Y-shaped antibody; allows open & close to accommodate binding to two epitopes; because it is open, it can be cleaved by proteases (e.g. papain) to generate the Fab & Fc fragments
  • 13. Immunoglobulin Fragments: Structure/Function Relationships Fab Ag binding Fc Effector functions F(ab)2 Pepsin Fc Peptides F(ab)2
  • 14. Immunoglobulin Fragments: Structure/Function Relationships Fab Ag binding Valence = 1 Specificty determined by VH and VL Papain Fc Fab Fc Effector functions
  • 15. Immunoglobulin Fragments: Structure/Function Relationships Ag Binding Complement Binding Site Placental Transfer Binding to Fc Receptors
  • 16. IgG IgG1 IgG2 IgG3 IgG4 Subclasses show close overall relation Heavy chains = 1,2,3,4 Highest concentration in serum Plays major role in immune dfns. Small size ppt in surfaces (e.g. cross placental barrier) All normal indiv. have all IgG1>IgG2>IgG3>IgG4 IgG3 has shortest 1/2 life, highest catabolic rate, highest # S-S IgG4 = monoval. no aggl ppt rx., autoab to clot fac Autoab to DNA = IgG1,IgG3 Two H chains, Two L chains (either or but not both) Each H chain = 50 kD Each L chain = 25 kD MW approx. 150 kD, 7S, globulin
  • 17. IgG Structure Monomer (7S) IgG1, IgG2 and IgG4 IgG3
  • 18. IgG Structure Properties Major serum Ig Major Ig in extravascular spaces The only antibody to cross the placental Fixes complement Binds to Fc receptors Phagocytes - opsonization NK cells ADCC Binds to SPA
  • 19. IgM Structure Properties 3rd highest serum Ig First Ig made by fetus and B cells Produced early in the primary response The most efficient Ig Fixes complement Tail Piece Agglutinating Ig Binds to Fc receptors B cell surface Ig
  • 20. IgM Structure Pentamer (19S) composed 5 H2L2 units plus one molecule of J chain Extra domain (CH4) J chain CH4 J Chain
  • 21. Structural features of IgM Pentamer (5) First Ig produced following immun. Macroglobulin (M) 900 kD, 19S SSS S SS J chain Doesnt have hinge region has additional H domain Has a J chain (one of 2 Ig isotypes) 15 kD
  • 22. IgD Structure Monomer Tail piece Tail Piece
  • 23. IgD Structure Properties 4th highest serum Ig B cell surface Ig Does not bind complement
  • 24. Structural features of IgD Primarily a B cell antigen receptor Long exposed hinge region 170kD, 7S, migrates as fast No interchain S-S bridges in H chains Readily denatured
  • 26. IgA Properties 2nd highest serum Ig Major secretory Ig ( saliva, tears, respiratory, intestinal, and genital tract secretions.) Does not fix complement unless aggregated Binds to Fc receptors on some cells
  • 27. IgA Structure Serum - monomer Secretions (sIgA) Dimer (11S), sIgA molecule consists of two H2L2 units plus one molecule each of J chain and secretory component(SC or SP) J ChainSecretory Piece
  • 28. IgE Structure Monomer Extra domain (CH4) CH4
  • 29. Structural features of IgE Sometimes called reaginic ag Mediates allergies (Type I hypersensitivies) 190 kDa, 8S, migrates as fast Contains an extra domain (CH4) which binds to mast cells & basophils May remain attached for long time when ag reappears, cross links IgE on mast cell surface, release mast-cell granules & signs of anaphylaxis
  • 30. IgE Structure Properties Least common serum Ig Allergic reactions Parasitic infections Does not fix complement
  • 31. Fixation of C1 by IgG and IgM Abs No activation Activation
  • 32. B Cell Antigen Receptor (BcR) Ig-Ig- Ig-Ig-
  • 33. L & H chain folding to yield 3 CDR in each chain to form walls of ag binding groove