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Philadelphia, PA United States
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Technology / Software / Internet
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About
Casey is an assistant professor in the Department of Systems Pharmacology and Translational Therapeutics in the Perelman School of Medicine at the University of Pennsylvania. His lab develops deep learning methods that integrate distinct large-scale datasets to extract the rich and intrinsic information embedded in such integrated data. This approach reveals underlying principles of an organism’s genetics, its environment, and its response to that environment. Extracting this key contextual information reveals where the data’s context doesn’t fit existing models and raises the questions that a complete collection of publicly available data indicates researchers should be asking.
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bioinformatics
big data
genomics
denoising autoencoders
networks
machine learning
computational biology
data science
data integration
neural networks
gene expression
microbiology
deep learning
gwas
genetic epidemiology
systems biology
rocky2015
netwas
tissue-specific
ehr
cancer
pathway
unsupervised
adage
reproducibility
research parasite
parasite award
open source
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