Personal Information
Organization / Workplace
Barcelona Area, Spain Spain
Occupation
NGS data analysis Coordinator at Centre for Genomic Regulation (CRG)
Industry
Medical / Health Care / Pharmaceuticals
About
Bioinformatician expert of Next Generation Sequencing data analysis (PhD). Currently working at Centre for Genomic Regulation in Barcelona, Spain, as NGS data analysis coordinator in the Bioinformatics Core Facility. My work includes to supervise projects about a broad variety of NGS application such as assembly and annotation of genomic and transcriptomic data (mRNAseq and microRNAseq), detection of interaction protein/DNA and protein/RNA (chip-seq and clip-seq), metagenomic analysis. I'm also involved in pathway analysis, gene-set enrichment and motif detection. I participated in more than 60 different projects and in 3 international genome projects (melon, bean and lynx) being part of ...
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Tags
ngs
bioinformatics
chipseq
nextflow
covariance
non-coding rnas
secondary structure
macs
annowiki
annotation
genome project
semantic wiki
16s
microbes
metagenomics
science
reproducible science
data format
qc
dna vectors
assembly
docker
singularity
linux containers
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