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Anexo d

Allan Nunes
Allan Nunes

The document is a table listing various virus families, genera, species, genome size, presence of homologous regions and repetitive units, and host organisms. It summarizes preliminary screening of viruses that could potentially be identified using an approach to amplify repetitive regions to increase sensitivity. More studies are needed to confirm the results presented in the table. The table provides information on DNA and RNA viruses that infect a variety of organisms, from humans and animals to plants, insects, and single-celled organisms.

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Table 1 - Virus potentially identified by the proposed approach. Fam鱈lia Sub-familia G棚nero Esp辿cies Tamanho do Genoma HR UR Hospedeiro HHV-1 152 kb (linear) Yes (?) > 130 pb (?) Humano HHV-2 154 kb (linear) Yes (?) > 130 pb (?) Humano Varicellovirus HHV-3 124 kb (linear) Yes (?) > 30 pb (?) Humano Cytomegalovirus HHV-5 235 kb (linear) Yes (?) > 500 pb (?) Humano HHV-6A 159 kb (linear) Yes (?) > 150 (?) Humano HHV-6B 162 kb (linear) Yes (?) > 70 pb (?) Humano HHV-7 153 kb (linear) Yes (?) > 60 pb (?) Humano Lymphocryptovirus HHV-4 171 kb (linear) Yes (?) 100 pb Humano Rhadinovirus HHV 8 137 kb (linear) Yes (?) ? Humano HAdV-C 36 kb (linear) Yes (?) 102 pb Humano HAdV-A 34 kb (linear) Yes (?) 164 pb Humano HAdV-B 35 kb (linear) Yes (?) 136 pb Humano HAdV-D 35 kb (linear) Yes (?) 211 pb Humano HAdV-E 36 kb (linear) Yes (?) 116 pb Humano HAdV-F 34 kb (linear) Yes (?) 163 pb Humano Polyomaviridae - Polyomavirus SV-40 5 kb (circular) No 72 pb Humano Molluscipoxvirus MOCV 190 kb (linear) Yes (?) > 70 pb (?) Humano VAVC 194 kb (linear) Yes (?) ~100 pb (?) Humano VARV 185 kb (linear) Yes (?) > 50 pb (?) Humano Parapoxvirus ORFV 140 kb (linear) Yes (?) ~100 pb (?) Humano Avipoxvirus FWPV 290 kb (linear) Yes (?) ~ 101 pb (?) Aves Capripoxvirus SPPV 150 kb (linear) No (?) ~80 pb Cabra dsDNA Virus Herpesviridae Alphaherpesvirinae Simplexvirus Betaherpesvirinae Roseolovirus GammaHerpesvirinae Mastadenovirus Poxviridae Chordopoxvirinae Orthopoxvirus Adenoviridae - ANEXO D Foi feita uma triagem de poss鱈veis v鱈rus para os quais pode ser aplicada a t辿cnica de amplifica巽達o de regi探es repetitivas para aumento da sensibilidade do m辿todo. Mais estudos s達o necess叩rios para confirmar os resultados apresentados nesta tabela.
MYXV 162 kb (linear) No (?) <100 pb Coelho RFV 160 kb (linear) No (?) >100 pb Coelho Suipoxvirus SWPV 147 kb (linear) No (?) < 100 pb Porco Yatapoxvirus YMTV 135 kb (linear) No (?) < 100 pb Macacos Cervidpoxvirus 167 kb (linear) Yes (?) ~110 pb Veado Entomopoxvirinae Betaentomopoxvirus AMEV 233 kb (linear) Yes (?) ~200 pb Insetos Mimiviridae - Mimivirus APMV 1.200 kb (linear) ?? 51 / 77 / ~150 (?) Ameba Chlorovirus PBCV-1 330 kb Yes (?) ~120 pb Alga Coccolithovirus EhV-86 408 kb Yes (?) ~110 pb Alga Phaeovirus EsV-1 336 kb Yes (?) ~160 pb Alga Iridovirus IIV-6 213 kb (linear) Yes (?) ~100 pb Insetos Chloriridovirus IIV-3 191 kb (linear) Yes (?) ~200 pb Mosquito Lymphocystivirus LVDV-1 103 kb (linear) Yes (?) ~70 pb Peixe Megalocytivirus ISKNV 111 kb (linear) Yes (?) ~110 pb Peixe Ranavirus FV-3 106 kb (linear) Yes (?) ~115 pb Sapo, cobra Nimaviridae - Whispovirus WSSV 300 kb (circular) Yes Crust叩ceos Asfarviridae - Asfivirus ASFV 170 kb (linear) No (?) ~115 pb Porco Glossinavirus GHV 291 kb (circular) No (?) ~130 pb Mosca Muscavirus MHV 124 kb (circular) No (?) ~130 pb Mosca Ascoviridae - Ascovirus SfAV-1a 157 kb (circular) Yes (?) ~150 pb Noctu鱈deos Alphabaculovirus AcMNPV 134 kb (circular) Yes 6 (?) Insetos Betabaculovirus CPGV 123 kb (circular) Yes 3 (?) Artropodes Deltabaculovirus CuniNPV 108 kb (circular) Yes 5 (?) Larva de mosquito Gammabaculovirus NeleNPV 82 kb (circular) Yes 8 (?) Hymenoptera Erythrovirus B19 5 kb (linear) No (?) ~300 nt (?) Humano Dependovirus AAV-2 4 kb (linear) No (?) ~125 nt (?) Humano Gammaretrovirus XMRV 8 kb (linear) Yes (?) 459 / 143 nt Humano HTLV-1 8 kb (linear) No 228 nt Humano HTLV-2 9 kb (linear) No 762 nt Humano HTLV-3 8.9 kb (linear) No 697 nt Humano HIV-1 9.1 kb (linear) No 96 nt Humano Poxviridae Leporipoxvirus - Hytrosaviridae - Retroviridae Orthoretrovirinae Deltaretrovirus Lentivirus Baculoviridae - ssDNA Virus Parvoviridae - ssRNA (RT) Phycodnaviridae - Iridoviridae
HIV-2 10.3 kb (linear) No 855 nt Humano Spumaretrovirus SFV 13.2 kb (linear) No 1760 nt Humano HR - Regi探es hom坦logas UR - Unidade de Repeti巽達o Lentivirus

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Anexo d

  • 1. Table 1 - Virus potentially identified by the proposed approach. Fam鱈lia Sub-familia G棚nero Esp辿cies Tamanho do Genoma HR UR Hospedeiro HHV-1 152 kb (linear) Yes (?) > 130 pb (?) Humano HHV-2 154 kb (linear) Yes (?) > 130 pb (?) Humano Varicellovirus HHV-3 124 kb (linear) Yes (?) > 30 pb (?) Humano Cytomegalovirus HHV-5 235 kb (linear) Yes (?) > 500 pb (?) Humano HHV-6A 159 kb (linear) Yes (?) > 150 (?) Humano HHV-6B 162 kb (linear) Yes (?) > 70 pb (?) Humano HHV-7 153 kb (linear) Yes (?) > 60 pb (?) Humano Lymphocryptovirus HHV-4 171 kb (linear) Yes (?) 100 pb Humano Rhadinovirus HHV 8 137 kb (linear) Yes (?) ? Humano HAdV-C 36 kb (linear) Yes (?) 102 pb Humano HAdV-A 34 kb (linear) Yes (?) 164 pb Humano HAdV-B 35 kb (linear) Yes (?) 136 pb Humano HAdV-D 35 kb (linear) Yes (?) 211 pb Humano HAdV-E 36 kb (linear) Yes (?) 116 pb Humano HAdV-F 34 kb (linear) Yes (?) 163 pb Humano Polyomaviridae - Polyomavirus SV-40 5 kb (circular) No 72 pb Humano Molluscipoxvirus MOCV 190 kb (linear) Yes (?) > 70 pb (?) Humano VAVC 194 kb (linear) Yes (?) ~100 pb (?) Humano VARV 185 kb (linear) Yes (?) > 50 pb (?) Humano Parapoxvirus ORFV 140 kb (linear) Yes (?) ~100 pb (?) Humano Avipoxvirus FWPV 290 kb (linear) Yes (?) ~ 101 pb (?) Aves Capripoxvirus SPPV 150 kb (linear) No (?) ~80 pb Cabra dsDNA Virus Herpesviridae Alphaherpesvirinae Simplexvirus Betaherpesvirinae Roseolovirus GammaHerpesvirinae Mastadenovirus Poxviridae Chordopoxvirinae Orthopoxvirus Adenoviridae - ANEXO D Foi feita uma triagem de poss鱈veis v鱈rus para os quais pode ser aplicada a t辿cnica de amplifica巽達o de regi探es repetitivas para aumento da sensibilidade do m辿todo. Mais estudos s達o necess叩rios para confirmar os resultados apresentados nesta tabela.
  • 2. MYXV 162 kb (linear) No (?) <100 pb Coelho RFV 160 kb (linear) No (?) >100 pb Coelho Suipoxvirus SWPV 147 kb (linear) No (?) < 100 pb Porco Yatapoxvirus YMTV 135 kb (linear) No (?) < 100 pb Macacos Cervidpoxvirus 167 kb (linear) Yes (?) ~110 pb Veado Entomopoxvirinae Betaentomopoxvirus AMEV 233 kb (linear) Yes (?) ~200 pb Insetos Mimiviridae - Mimivirus APMV 1.200 kb (linear) ?? 51 / 77 / ~150 (?) Ameba Chlorovirus PBCV-1 330 kb Yes (?) ~120 pb Alga Coccolithovirus EhV-86 408 kb Yes (?) ~110 pb Alga Phaeovirus EsV-1 336 kb Yes (?) ~160 pb Alga Iridovirus IIV-6 213 kb (linear) Yes (?) ~100 pb Insetos Chloriridovirus IIV-3 191 kb (linear) Yes (?) ~200 pb Mosquito Lymphocystivirus LVDV-1 103 kb (linear) Yes (?) ~70 pb Peixe Megalocytivirus ISKNV 111 kb (linear) Yes (?) ~110 pb Peixe Ranavirus FV-3 106 kb (linear) Yes (?) ~115 pb Sapo, cobra Nimaviridae - Whispovirus WSSV 300 kb (circular) Yes Crust叩ceos Asfarviridae - Asfivirus ASFV 170 kb (linear) No (?) ~115 pb Porco Glossinavirus GHV 291 kb (circular) No (?) ~130 pb Mosca Muscavirus MHV 124 kb (circular) No (?) ~130 pb Mosca Ascoviridae - Ascovirus SfAV-1a 157 kb (circular) Yes (?) ~150 pb Noctu鱈deos Alphabaculovirus AcMNPV 134 kb (circular) Yes 6 (?) Insetos Betabaculovirus CPGV 123 kb (circular) Yes 3 (?) Artropodes Deltabaculovirus CuniNPV 108 kb (circular) Yes 5 (?) Larva de mosquito Gammabaculovirus NeleNPV 82 kb (circular) Yes 8 (?) Hymenoptera Erythrovirus B19 5 kb (linear) No (?) ~300 nt (?) Humano Dependovirus AAV-2 4 kb (linear) No (?) ~125 nt (?) Humano Gammaretrovirus XMRV 8 kb (linear) Yes (?) 459 / 143 nt Humano HTLV-1 8 kb (linear) No 228 nt Humano HTLV-2 9 kb (linear) No 762 nt Humano HTLV-3 8.9 kb (linear) No 697 nt Humano HIV-1 9.1 kb (linear) No 96 nt Humano Poxviridae Leporipoxvirus - Hytrosaviridae - Retroviridae Orthoretrovirinae Deltaretrovirus Lentivirus Baculoviridae - ssDNA Virus Parvoviridae - ssRNA (RT) Phycodnaviridae - Iridoviridae
  • 3. HIV-2 10.3 kb (linear) No 855 nt Humano Spumaretrovirus SFV 13.2 kb (linear) No 1760 nt Humano HR - Regi探es hom坦logas UR - Unidade de Repeti巽達o Lentivirus