1) The document describes developing a microtiter plate-based assay using resazurin dye to test the susceptibility of pathogens to different antimicrobials.
2) Standardization experiments were conducted to determine the optimal bacterial concentration, dye concentration, and incubation times for common pathogens. A concentration of 106 cfu/ml bacteria and 0.5mM resazurin dye were found to give reliable results within 4-16 hours.
3) The developed assay was validated by testing 20 E. coli clinical isolates against various antibiotics and comparing results to standard disc diffusion testing. Most results matched between the two methods.
Microbial and chemical analysis of potable waterRajpal Choudhary
油
This document presents the results of a study analyzing the microbial and chemical composition of potable water sources within Lagos University in Nigeria. Water samples were collected from four tap sources on campus and tested for various microbes using membrane filtration and agar plating. Tests found generally acceptable chemical quality according to WHO standards, with the mean numbers of microbial species and selected chemical properties reported for the water distribution system. The study aimed to evaluate water safety and suggest methods for reducing water-borne disease incidence on campus.
This document discusses phytoremediation, which uses plants to remove contaminants from soil, water, or sediment. It describes various phytoremediation processes like phytoextraction, rhizofiltration, phytostabilization, and phytotransformation. Case studies examine using water hyacinth and duckweed to remove heavy metals like cadmium and zinc from wastewater. While low-cost and environmentally friendly, phytoremediation has disadvantages like slow cleanup times and potential for contaminants to enter the food chain. Overall, phytoremediation can play a role in remediating contaminated sites in an ecological and sustainable manner.
This document provides an overview of the history and methods of microbial identification. It discusses how identification methods have evolved from using tubed and plated media in the 1960s to now using miniaturized biochemical reactions and system-dependent approaches comparing reaction patterns to databases. Modern rapid identification approaches include varying conventional testing, unique substrates that detect activity without growth, antigen-antibody reactions, and molecular detection methods. Specific techniques like colorimetry, fluorescence, and turbidity are used to detect metabolic activity. Rapid tests for identifying common bacteria like Staphylococcus aureus and Streptococcus pyogenes using agglutination, chromogenic media, DNA probes, PCR, and immunochromatographic assays are also overviewed.
This document discusses animal cell culture. It defines tissue culture as the in vitro culture of cells, tissues or organs. There are three main types of tissue culture: organ culture, tissue culture, and cell culture. Cell culture involves dispersing tissue into a single cell suspension which can then be cultured as a monolayer or in suspension. Cell culture has advantages for research, commercial production, and reducing animal use. Key factors that affect cell culture include using appropriate cell types, providing a suitable environment with optimal solid, liquid and gaseous phases, temperature, and maintaining aseptic techniques.
The Nobel Prize is awarded annually for achievements in physics, chemistry, physiology or medicine, literature, and peace. The prizes were first awarded in 1901 in accordance with Alfred Nobel's will. The 1901 prizes in physiology or medicine were awarded to Emil von Behring for his work on diphtheria antitoxin and Paul Ehrlich for his work on immunity and chemotherapy. Subsequent prizes have been awarded for major advances in understanding the immune system, including discoveries of monoclonal antibodies, the major histocompatibility complex, immune tolerance, and the roles of dendritic cells and innate immunity.
Bacteriological analysis of drinking water by MPN method.prakashtu
油
This document describes the MPN (Most Probable Number) method for analyzing drinking water bacteriologically. The MPN method involves inoculating water samples in multiple dilutions into lactose broths to detect coliform bacteria presence. Positive samples are then cultured on EMB agar to isolate and identify E. coli. Confirmed E. coli colonies produce acid and gas when cultured in lactose broth at 44.5属C. The number of positive samples at each dilution level is used with statistical tables to estimate the MPN of coliform bacteria per 100ml of water. This provides a statistical analysis of bacteria levels in drinking water samples.
Bioreactors for animal cell suspension cultureGrace Felciya
油
This document discusses bioreactors for animal cell suspension culture. It begins by introducing animal cell culture and some key developments that enabled it. There are two main types of culture: primary culture using explants or enzymes, and secondary culture which is derived from primary culture. Cells can be anchorage-dependent, growing in monolayers, or non-anchorage dependent, growing in suspension. Bioreactors provide conditions for mass cultivation of suspension cells. Properties of animal cells require gentle mixing and aeration in bioreactors. Common bioreactor types for suspension culture include stirred tank, continuous flow, and airlift fermentors. Perfusion culture allows continuous medium exchange to achieve high cell densities and productivity.
The document discusses the design and preparation of media for fermentation. It describes various types of fermentation processes and factors to consider when formulating fermentation media. Key aspects covered include carbon and nitrogen sources, minerals, vitamins, inducers, inhibitors, and other nutrients required by microorganisms. The document also discusses media for specific types of fermentations and optimization of media composition.
The document discusses biofilms and their antibiotic resistance. It notes that biofilms are assemblages of surface-attached microbial cells encased in an extracellular matrix. This matrix provides protection from antibiotics by acting as a diffusion barrier and binding antimicrobial agents. Additionally, the heterogeneous conditions within biofilms, including nutrient depletion and slower growth, contribute to antibiotic tolerance in some cells. Genetic transfer of resistance genes is also facilitated within dense biofilm communities.
Enzyme-Linked Immunosorbent Assay (ELISA) , Types of Elisa , Presentation on ...Rajesh Singh
油
ELISA stands for enzyme-linked immunosorbent assay.
It is a common laboratory technique which is used to measure the concentration of an analyte (antigens) in solution.
Where Ag-Ab interaction is monitored by enzyme measurement.
It is similar in principle to Radio Immuno Assay (RIA) but It depends on an enzyme rather than a radioactive label.
This document provides an overview of electrophoresis. It discusses how electrophoresis works, involving the movement of charged particles through an electrolyte when subjected to an electric field. It then covers the history, factors affecting electrophoresis, types of electrophoresis including paper, SDS-PAGE, native gel, gradient gel, IEF gels, 2D gel electrophoresis, protein blotting, pulsed field gel electrophoresis, and capillary electrophoresis. It also discusses instrumentation, reagents, and applications of various electrophoresis techniques.
This document provides information about bacterial biofilms. It discusses what biofilms are, examples of biofilms, how they form, their properties, composition, impacts and problems they can cause. It also covers antibiotic resistance in biofilms and strategies to control biofilms, including using quorum sensing inhibitors, improving drug delivery systems, and preventing biofilm formation and colonization.
Most probable number or multiple tube fermentation techniqueSamsuDeen12
油
multiple tube fermentation or most probable number is a microbiological technique used to check the portability of water. microbial analysis of water is determined, and distinguished between faecal and non faecal contaminated water.
Bioremediation uses microorganisms to break down hazardous substances into less toxic forms. There are two main techniques: in-situ treats contaminated soil and groundwater in place without excavation, while ex-situ excavates soil prior to treatment using methods like biopiles, bioreactors, land farming, and windrows that optimize conditions for microorganisms. The document discusses various enhanced bioremediation methods for both in-situ and ex-situ treatment.
This document describes the MTT assay, a colorimetric assay used to measure cell viability and cytotoxicity. The MTT assay works by using the enzyme mitochondrial dehydrogenase in living cells to reduce the yellow tetrazolium dye MTT to purple insoluble formazan. The amount of formazan produced is directly proportional to the number of viable cells. The document outlines the principle, reagents, procedure, troubleshooting, advantages, and disadvantages of the MTT assay. Commonly available MTT assay kits are also listed.
Principle and applications of flow cytometryDinesh Gangoda
油
Flow cytometry is a technique used to analyze physical and chemical characteristics of cells or particles in suspension as they flow in a fluid stream past a laser. It works by fluorescently labeling cells and components, then passing them in single file through a laser which detects scattered and fluorescent light. This allows for quantitative and qualitative analysis of cell populations. Properties like size, granularity, and fluorescence intensity can be measured. Main applications include immunophenotyping, cell sorting, cell cycle analysis, apoptosis analysis, and measuring intracellular calcium flux and cell proliferation in response to stimuli.
This document summarizes procedures for cryopreserving and reconstituting preserved cell lines. It discusses that cryopreservation allows indefinite storage of biological material at -196属C. Common cryoprotectants like DMSO and glycerol are added to cell suspensions to protect cells from ice crystal formation during freezing and thawing. The document provides protocols for freezing suspension and adherent cell cultures slowly at 1属C/minute then storing in liquid nitrogen. It also outlines two methods for rapidly thawing cells involving either direct plating or centrifugation to remove cryoprotectants before culturing.
This document discusses various types of cell cultures, including primary cultures which have a limited lifespan, finite cultures which can proliferate for a limited number of divisions, and continuous cell lines which have unlimited proliferative potential. It also describes common cell culture techniques such as subculturing adherent cells using trypsin, maintaining cell viability through proper conditions, and preserving cells through cryopreservation in liquid nitrogen. Contamination is a risk that can arise from multiple sources during cell culture work.
Animal models are used in cancer research to better understand human disease. Rodents like mice and rats are commonly used models as their basic biology is similar to humans. Mice can be genetically altered to induce cancer through methods like introducing oncogenes or exposing them to carcinogens. Cancer cells or tumors can also be transplanted into mice from humans. Rabbits, dogs, cats, and other animals are also used as cancer models. Each offers advantages like size, environments, and similarities to specific human cancers. Studying naturally occurring and experimental cancers in these various species provides insights that help advance cancer treatments for humans.
The document describes various aspects of bacterial growth in batch culture. It discusses the different types of cell division used by bacteria, including binary fission, budding, and filamentous growth. It then focuses specifically on binary fission and describes the typical growth phases seen in a bacterial growth curve: lag phase, exponential growth phase, stationary phase, and death phase. It also discusses various methods for measuring and quantifying bacterial growth, including direct counts, viable counts, turbidity measurements, and generating a growth curve by plotting measurements over time. Finally, it covers several environmental factors that can influence bacterial growth rates, such as temperature, pH, water availability, and oxygen levels.
This document discusses 3D cell culture systems and their application in drug discovery. It notes that 3D cell cultures better mimic the in vivo cellular environment compared to traditional 2D cultures. Cells in 3D cultures exhibit different gene expression, morphology, proliferation rates, and responses to drugs compared to 2D cultures. This makes 3D cultures more predictive of in vivo responses during drug testing. The document outlines different types of 3D culture systems, such as scaffold-based, scaffold-free, spheroids and organoids. It also discusses advantages of 3D cultures for applications in areas like developmental biology, disease modeling, regenerative medicine, and personalized drug testing.
This document discusses quality control in microbiology. It covers various aspects of quality control including the pre-analytic, analytic and post-analytic phases of diagnostic testing. In the pre-analytic phase, it discusses proper specimen collection, transport and processing. The analytic phase covers microscopic examination, culture processing, identification and antimicrobial susceptibility testing. It also discusses quality control of equipment, reagents and culture media. The post-analytic phase involves reporting of results and interaction with epidemiologists. Maintaining accurate records and samples is also emphasized.
Role of genetically engineered microorganisms in biodegradationMSCW Mysore
油
1. The document discusses biological recovery from oil spills, including the environmental effects of oil spills and various cleanup methods. It also examines the role of genetically engineered microorganisms (GEMs) in biodegrading pollutants.
2. Key cleanup methods include booms, skimming, solidifiers, dispersants, and bioremediation using oil-consuming bacteria. GEMs have been developed to enhance biodegradation by modifying enzyme specificity and constructing new metabolic pathways.
3. While GEMs show potential for degrading various hydrocarbons, field trials of GEMs for bioremediation remain limited due to regulations and public concerns.
The document discusses biosensors, which are analytical devices that combine a biological detection element with a sensor and transducer. The first biosensor was invented in 1950 and measured oxygen in blood. There are three generations of biosensors with improvements in how the biological element interacts with the transducer. Biosensors can detect specific analytes and have applications in medicine, environmental monitoring, agriculture, and food industries. Common types include electrochemical, physical, optical, and wearable biosensors.
Antimicrobial susceptibility testing determines how effective antibiotic therapy is against bacterial infections. There are several methods for testing, including disk diffusion, dilution tests, and automated systems. Disk diffusion involves placing disks impregnated with antibiotics onto inoculated agar plates and measuring inhibition zones. Mueller-Hinton agar is commonly used as the growth medium. Dilution tests determine the minimum inhibitory concentration (MIC) of antibiotics using serial dilutions in broth or agar. Automated systems streamline the testing process. Proper technique and controls are important for accurate and reproducible results.
This document discusses antibiotic sensitivity testing, which determines the effectiveness of antibiotics against bacteria. It describes the purpose of testing as guiding treatment selection and monitoring resistance trends. Common testing methods are discussed, including disk diffusion, broth dilution, and agar dilution for minimum inhibitory concentration determination. The disk diffusion method is described in detail, outlining inoculum preparation, disk application, incubation, and result interpretation. Factors influencing testing and quality control are also covered.
The document discusses the design and preparation of media for fermentation. It describes various types of fermentation processes and factors to consider when formulating fermentation media. Key aspects covered include carbon and nitrogen sources, minerals, vitamins, inducers, inhibitors, and other nutrients required by microorganisms. The document also discusses media for specific types of fermentations and optimization of media composition.
The document discusses biofilms and their antibiotic resistance. It notes that biofilms are assemblages of surface-attached microbial cells encased in an extracellular matrix. This matrix provides protection from antibiotics by acting as a diffusion barrier and binding antimicrobial agents. Additionally, the heterogeneous conditions within biofilms, including nutrient depletion and slower growth, contribute to antibiotic tolerance in some cells. Genetic transfer of resistance genes is also facilitated within dense biofilm communities.
Enzyme-Linked Immunosorbent Assay (ELISA) , Types of Elisa , Presentation on ...Rajesh Singh
油
ELISA stands for enzyme-linked immunosorbent assay.
It is a common laboratory technique which is used to measure the concentration of an analyte (antigens) in solution.
Where Ag-Ab interaction is monitored by enzyme measurement.
It is similar in principle to Radio Immuno Assay (RIA) but It depends on an enzyme rather than a radioactive label.
This document provides an overview of electrophoresis. It discusses how electrophoresis works, involving the movement of charged particles through an electrolyte when subjected to an electric field. It then covers the history, factors affecting electrophoresis, types of electrophoresis including paper, SDS-PAGE, native gel, gradient gel, IEF gels, 2D gel electrophoresis, protein blotting, pulsed field gel electrophoresis, and capillary electrophoresis. It also discusses instrumentation, reagents, and applications of various electrophoresis techniques.
This document provides information about bacterial biofilms. It discusses what biofilms are, examples of biofilms, how they form, their properties, composition, impacts and problems they can cause. It also covers antibiotic resistance in biofilms and strategies to control biofilms, including using quorum sensing inhibitors, improving drug delivery systems, and preventing biofilm formation and colonization.
Most probable number or multiple tube fermentation techniqueSamsuDeen12
油
multiple tube fermentation or most probable number is a microbiological technique used to check the portability of water. microbial analysis of water is determined, and distinguished between faecal and non faecal contaminated water.
Bioremediation uses microorganisms to break down hazardous substances into less toxic forms. There are two main techniques: in-situ treats contaminated soil and groundwater in place without excavation, while ex-situ excavates soil prior to treatment using methods like biopiles, bioreactors, land farming, and windrows that optimize conditions for microorganisms. The document discusses various enhanced bioremediation methods for both in-situ and ex-situ treatment.
This document describes the MTT assay, a colorimetric assay used to measure cell viability and cytotoxicity. The MTT assay works by using the enzyme mitochondrial dehydrogenase in living cells to reduce the yellow tetrazolium dye MTT to purple insoluble formazan. The amount of formazan produced is directly proportional to the number of viable cells. The document outlines the principle, reagents, procedure, troubleshooting, advantages, and disadvantages of the MTT assay. Commonly available MTT assay kits are also listed.
Principle and applications of flow cytometryDinesh Gangoda
油
Flow cytometry is a technique used to analyze physical and chemical characteristics of cells or particles in suspension as they flow in a fluid stream past a laser. It works by fluorescently labeling cells and components, then passing them in single file through a laser which detects scattered and fluorescent light. This allows for quantitative and qualitative analysis of cell populations. Properties like size, granularity, and fluorescence intensity can be measured. Main applications include immunophenotyping, cell sorting, cell cycle analysis, apoptosis analysis, and measuring intracellular calcium flux and cell proliferation in response to stimuli.
This document summarizes procedures for cryopreserving and reconstituting preserved cell lines. It discusses that cryopreservation allows indefinite storage of biological material at -196属C. Common cryoprotectants like DMSO and glycerol are added to cell suspensions to protect cells from ice crystal formation during freezing and thawing. The document provides protocols for freezing suspension and adherent cell cultures slowly at 1属C/minute then storing in liquid nitrogen. It also outlines two methods for rapidly thawing cells involving either direct plating or centrifugation to remove cryoprotectants before culturing.
This document discusses various types of cell cultures, including primary cultures which have a limited lifespan, finite cultures which can proliferate for a limited number of divisions, and continuous cell lines which have unlimited proliferative potential. It also describes common cell culture techniques such as subculturing adherent cells using trypsin, maintaining cell viability through proper conditions, and preserving cells through cryopreservation in liquid nitrogen. Contamination is a risk that can arise from multiple sources during cell culture work.
Animal models are used in cancer research to better understand human disease. Rodents like mice and rats are commonly used models as their basic biology is similar to humans. Mice can be genetically altered to induce cancer through methods like introducing oncogenes or exposing them to carcinogens. Cancer cells or tumors can also be transplanted into mice from humans. Rabbits, dogs, cats, and other animals are also used as cancer models. Each offers advantages like size, environments, and similarities to specific human cancers. Studying naturally occurring and experimental cancers in these various species provides insights that help advance cancer treatments for humans.
The document describes various aspects of bacterial growth in batch culture. It discusses the different types of cell division used by bacteria, including binary fission, budding, and filamentous growth. It then focuses specifically on binary fission and describes the typical growth phases seen in a bacterial growth curve: lag phase, exponential growth phase, stationary phase, and death phase. It also discusses various methods for measuring and quantifying bacterial growth, including direct counts, viable counts, turbidity measurements, and generating a growth curve by plotting measurements over time. Finally, it covers several environmental factors that can influence bacterial growth rates, such as temperature, pH, water availability, and oxygen levels.
This document discusses 3D cell culture systems and their application in drug discovery. It notes that 3D cell cultures better mimic the in vivo cellular environment compared to traditional 2D cultures. Cells in 3D cultures exhibit different gene expression, morphology, proliferation rates, and responses to drugs compared to 2D cultures. This makes 3D cultures more predictive of in vivo responses during drug testing. The document outlines different types of 3D culture systems, such as scaffold-based, scaffold-free, spheroids and organoids. It also discusses advantages of 3D cultures for applications in areas like developmental biology, disease modeling, regenerative medicine, and personalized drug testing.
This document discusses quality control in microbiology. It covers various aspects of quality control including the pre-analytic, analytic and post-analytic phases of diagnostic testing. In the pre-analytic phase, it discusses proper specimen collection, transport and processing. The analytic phase covers microscopic examination, culture processing, identification and antimicrobial susceptibility testing. It also discusses quality control of equipment, reagents and culture media. The post-analytic phase involves reporting of results and interaction with epidemiologists. Maintaining accurate records and samples is also emphasized.
Role of genetically engineered microorganisms in biodegradationMSCW Mysore
油
1. The document discusses biological recovery from oil spills, including the environmental effects of oil spills and various cleanup methods. It also examines the role of genetically engineered microorganisms (GEMs) in biodegrading pollutants.
2. Key cleanup methods include booms, skimming, solidifiers, dispersants, and bioremediation using oil-consuming bacteria. GEMs have been developed to enhance biodegradation by modifying enzyme specificity and constructing new metabolic pathways.
3. While GEMs show potential for degrading various hydrocarbons, field trials of GEMs for bioremediation remain limited due to regulations and public concerns.
The document discusses biosensors, which are analytical devices that combine a biological detection element with a sensor and transducer. The first biosensor was invented in 1950 and measured oxygen in blood. There are three generations of biosensors with improvements in how the biological element interacts with the transducer. Biosensors can detect specific analytes and have applications in medicine, environmental monitoring, agriculture, and food industries. Common types include electrochemical, physical, optical, and wearable biosensors.
Antimicrobial susceptibility testing determines how effective antibiotic therapy is against bacterial infections. There are several methods for testing, including disk diffusion, dilution tests, and automated systems. Disk diffusion involves placing disks impregnated with antibiotics onto inoculated agar plates and measuring inhibition zones. Mueller-Hinton agar is commonly used as the growth medium. Dilution tests determine the minimum inhibitory concentration (MIC) of antibiotics using serial dilutions in broth or agar. Automated systems streamline the testing process. Proper technique and controls are important for accurate and reproducible results.
This document discusses antibiotic sensitivity testing, which determines the effectiveness of antibiotics against bacteria. It describes the purpose of testing as guiding treatment selection and monitoring resistance trends. Common testing methods are discussed, including disk diffusion, broth dilution, and agar dilution for minimum inhibitory concentration determination. The disk diffusion method is described in detail, outlining inoculum preparation, disk application, incubation, and result interpretation. Factors influencing testing and quality control are also covered.
This document discusses antibiotic sensitivity testing (AST) to determine the most suitable antibiotic against a microorganism. It describes direct and indirect susceptibility testing methods and the common disk diffusion method. The disk diffusion method involves placing antibiotic disks on an inoculated agar plate and measuring inhibition zones to interpret if a microorganism is susceptible, intermediate, or resistant. Mueller-Hinton agar is typically used as the growth medium and factors influencing inhibition zone size are discussed. The E-test method and dilution methods for quantitative antibiotic susceptibility testing are also summarized.
This document discusses antimicrobial sensitivity testing. It provides information on:
1) Antimicrobial resistance has led to increased morbidity, mortality, and healthcare costs. Inappropriate antibiotic usage by physicians and the public fuels resistance.
2) Sensitivity testing determines how effective antibiotic therapy is against bacterial infections. It assists clinicians in choosing effective drugs and controlling antibiotic use.
3) Common methods include diffusion tests like Kirby-Bauer that use discs impregnated with antibiotics to measure inhibition zones, and dilution methods that determine the minimum inhibitory concentration. Both qualitative and quantitative techniques exist.
Microbiological culture sensitivity testSuhas Reddy C
油
Microbiological culture sensitivity tests involve growing microbial organisms in culture media under controlled conditions and testing their sensitivity to drugs. A sample is taken from an infected area and grown on a plate with antibiotics. The size of the zone of inhibition around each antibiotic disk indicates whether the microbe is susceptible, resistant, or intermediate. This helps clinicians select the most effective drug to treat a patient's infection and guide treatment decisions.
1) The study analyzed 120 environmental samples collected from 6 shrines in Kathmandu Valley to determine the presence of MRSA and MSSA.
2) A total of 21 S. aureus isolates were found, with 4 being MRSA (19%) and 17 being MSSA (81%).
3) Resistance to erythromycin and gentamicin was highest among MRSA isolates, while MSSA and MRSA isolates were both susceptible to linezolid, tetracycline, and clindamycin.
The effect of silver nanoparticles on Staphylococcus epidermidis biofilm biom...Nanomedicine Journal (NMJ)
油
Abstract
Objective(s):
Bacterial biofilm has been considered responsible for many deaths and high health costs worldwide. Their better protection against antibacterial agents compared to free living cells leads to poor treatment efficiency. Nanotechnology is promising approach to combat biofilm infections. The aim of the present study was to eradicate Staphylococcus epidermidis biofilm with silver nanoparticles (SNPs).
Materials and Methods:
SNPs were used at different concentrations (two fold dilutions) and incubation times (24, 48, 72 h). The crystal violet staining and pour plate assays were used to assess biofilm biomass and bacterial viability, respectively. The ability of SNPs on biofilm matrix eradication was assessed through optical density ratio (ODr). Positive control was defined as an ODr =1.0.
Results:
The crystal violet assay indicated that the biofilm matrixes were intact at different concentrations of SNOs and incubation times. There were no significant differences between these parameters (P >0.05). Bacterial enumeration studies revealed that higher concentrations of SNPs were more effective in killing bacteria than lower ones. Although, longer incubation times led to enhancement of anti-biofilm activity of SNPs.
Conclusion:
The anti-biofilm activity of SNPs was concentration- and time-dependent. The results of this study highlighted that SNPs were effective against cell viability; however they were ineffective against biomass.
This document presents information about anti-bacterial activity screening techniques. It discusses bacteriostatic agents, which prevent bacterial growth without killing bacteria, and assessments of bacteriostatic activity including serial dilution methods in fluid and solid media as well as cup plate and gradient plate methods. It also discusses bactericidal agents, which kill bacteria, and assessments of bactericidal activity including end-point or extinction time methods such as the Phenol coefficient test and varying the concentration or contact time of disinfectants. The document was presented to Dr. Chaluvaraju KC by Mr. Pradeep on the topic of anti-bacterial activity and screening techniques.
This document outlines preformulation studies conducted on the drug metronidazole, including characterization of its physical properties, solubility, stability, and compatibility with excipients. Key aspects that were evaluated include particle size, bulk density, angle of repose, pH, partition coefficient, stability under various conditions like temperature, humidity and light. Drug-excipient compatibility was also studied by storing mixtures at elevated temperature and observing for physical or chemical changes. The goal of these studies is to understand the drug's characteristics and behavior to aid in rational formulation design and selection of appropriate excipients and storage conditions.
This document provides guidelines for antimicrobial susceptibility testing. It discusses various testing methods including disk diffusion, dilution, and diffusion/dilution hybrid methods. Key factors that influence testing such as pH, moisture, and divalent cation content are summarized. Recommendations are provided for preparation of Mueller-Hinton agar medium, antibiotic stock solutions, filter paper disks, and bacterial inoculum standardization. The Kirby-Bauer disk diffusion method is described in detail as the recommended procedure.
1. The document discusses various methods of antimicrobial susceptibility testing including disk diffusion, dilution, and diffusion-dilution methods. It describes the Kirby-Bauer disk diffusion method in detail.
2. Key steps of the Kirby-Bauer method include preparing Mueller-Hinton agar, antibiotic discs, inoculum, and following standard procedures for performing the test and interpreting results.
3. Factors that can influence test results like pH, moisture, divalent cations, and thymidine/thymine content are discussed. Quality control is important for reliable and reproducible outcomes.
Microbial assays or microbiological assays could be a sort of bioassays designed to analyse the compounds or substances that have impact on micro-organisms. They help to estimate concentration and efficiency of antibiotics. Also facilitate in determination of the simplest anti-biotic appropriate for patient recovery.
Drug resistance occurs when microbes develop the ability to survive exposure to a drug that would normally kill them or limit their growth. There are several mechanisms by which microbes become resistant, including producing enzymes to destroy drugs, altering target sites, reducing drug accumulation, and modifying metabolic pathways. Resistance can be intrinsic, acquired through genetic mutations, or transferred between microbes. Tests like disc diffusion and dilution methods are used to determine antibiotic susceptibility and minimum inhibitory concentrations. Steps must be taken to prevent overuse and misuse of antibiotics in order to slow the development and spread of drug resistance.
Anti-Adhesion and Anti-Biofilm Effectiveness of Disinfectants Used In Hemodia...IJERA Editor
油
Biofilms are communities of microorganisms attached to a surface and included in an extracellular matrix making it resistant to exogenous deleterious agents. The aim of this study is to evaluate the anti-adhesive and anti-biofilm effect of five commercials disinfectants having different active principles (hydrogen peroxide, sodium hypochlorite, isopropyl alcohol and ethanol) on four Staphylococcus strains isolated from hemodialysis unit surfaces. The disinfectants anti-adhesive effect was estimated to an exceeding rate 70% for the various studied dilutions and 90% towards the pure products. Whereas the anti-biofilm effect showed an elimination rate varying between 10 % and 95 % according to the following parameters: active principle, time of contact, concentration and bacterial strain. Our study demonstrated that all tested products have an interesting anti-adhesive effect and that the peroxide of hydrogen is endowed with important anti-biofilm efficiency, followed by the alcoholic products and the sodium hypochlorite.
Biochemical and molecular characterization of antagonistic bacteria against y...eSAT Publishing House
油
IJRET : International Journal of Research in Engineering and Technology is an international peer reviewed, online journal published by eSAT Publishing House for the enhancement of research in various disciplines of Engineering and Technology. The aim and scope of the journal is to provide an academic medium and an important reference for the advancement and dissemination of research results that support high-level learning, teaching and research in the fields of Engineering and Technology. We bring together Scientists, Academician, Field Engineers, Scholars and Students of related fields of Engineering and Technology
Microbiological culture sensitivity testAkhil Joseph
油
The document discusses microbiological culture sensitivity testing which determines the susceptibility of bacteria to antibiotics. It defines susceptible, intermediate, and resistant classifications according to international standards. An example test result for an E. coli strain is given. The document also discusses the disk diffusion and broth dilution methods used to conduct sensitivity testing and determine the minimum inhibitory concentration of antibiotics. It provides details on how these tests are performed and interpreted.
This document describes methods for testing antibiotic susceptibility, including diffusion and dilution techniques. Diffusion methods involve placing antibiotic disks on agar seeded with bacteria, and measuring zones of inhibition. Dilution methods determine the minimum inhibitory concentration (MIC) - the lowest concentration of antibiotic that prevents bacterial growth. The agar disk diffusion and Etest are diffusion-based, while tube dilution is a common dilution method. Procedures are provided for disk diffusion, Etest, and determining MIC using serial dilutions of antibiotics in broth. Together, these methods assess which antibiotics will effectively treat bacterial infections.
ABSTRACT Gliclazide microspheres were prepared by ionotropic gelation method using bioadhesive polymers such as sodium alginate, carbopol 934, carbopol 971, HPMC K4M in different ratios. Totally twelve different formulations of gliclazide were prepared by using the above polymers. The microspheres were characterized for drug content, entrapment efficiency, swelling index, mucoadhesive property by In vitro wash-off test and in-vitro drug release. The results of this investigation indicate that ionic cross linking technique Ionotropic gelation method can be successfully employed to fabricate Model drug microspheres. Micrometric studies revealed that the mean particle size of the prepared microspheres was in the size range of 512-903 亮m and are suitable for bioadhesive microspheres for oral administration. The in-vitro mucoadhesive study demonstrated that microspheres of Model drug using sodium alginate along with Carbopol 934 as copolymer adhered to the mucus to a greater extent than the microspheres of Model drug using sodium alginate along with Carbopol 971 and HPMC K4Mas copolymers. Analysis of drug release mechanism showed that the drug release from the formulations followed non-Fickian diffusion and the best fit model was found to be Korsmeyer-Peppas. Based on the results of evaluation tests formulation coded T4 was concluded as best formulation. Keywords: Bioadhesive Microspheres, Gliclazide, Ionotropic gelation method.
Preservation of pharmaceutical products by S.D.Mankarsomeshwar mankar
油
Modified resazurin microtiter assay for in vitro assessment of different antimicrobials against laboratory pathogen
1. 1
Modified resazurin microtiter assay for in vitro assessment of
different antimicrobials against laboratory pathogen.
Objectives:
Development of microtitre plate-based
antibacterial assay incorporating
resazurin as an indicator of cell growth,
and its application in the in vitro
antibacterial screening of laboratory
pathogens.
1) To standardise the assay using
standard strains of bacteria, different
concentrations of dye, incubation
conditions (time).
2) To compare the disc diffusion assay
methods with the microtitre resazurin
reduction test in determining
susceptibility.
3) To validate the assay in clinical
samples.
Introduction:
Antibiotics have revolutionised
mankinds health status, allowing
treatment of life threatening infections.
But, resistance has been observed to
virtually most of the antimicrobial
agents approved for use in human and
veterinary clinical medicine. Moreover,
there is a limited number of
antimicrobials agents currently
available. This makes the selection of an
appropriate antimicrobial agent an
increasingly more challenging task. And
hence, it is essential to employ an in vitro
antibacterial assay that is simple, rapid,
efficient, reliable, sensitive, safe and
cost-effective. There are a variety of
formats for invitro susceptibility, most
common being disc diffusion, agar
dilution, broth macro dilution, broth
micro dilution and concentration
gradient test that are available for
antibacterial screening, can be a limiting
factor sometimes. As, all this
conventional methods requires solid
agar plates, and occupies space and
reagents and could be cumbersome and
tedious. Although disc diffusion assay is
the gold standard used in hospitals for
determining the suitable antimicrobial
agent against the microorganism causing
particular infection. We propose a
modified resazurin microtiter assay for
invitro assessment of different
antimicrobials against laboratory
pathogens. There are no reports in
literature where microtitre format using
discs and resazurin dye for evaluating
antimicrobial susceptibility has been
attempted. There is considerable
opportunity for improvement in the area
of rapid, economical detection of
bacterial resistance /susceptibility to
antibiotics.
Outcomes and benefits of the study:
This method, with incorporated
resazurin as indicator, would allow the
detection of microbial growth in
extremely small volumes of solution in
2. 2
microtiter plates faster than conventional
method using solid /liquid Medias.
An advantage of the microtiter format is
that it allows the screening of several
isolates in a short period of time.It could
visually determine the resistance
/susceptibility of the pathogen to a panel
of antibiotics, requiring less incubation
space. The economyof reagents and less
space constraints due to the
miniaturization of the test is another
advantage. This would result in the
development of a diagnostic test that is
simple, accurate, rapid and economical
in detecting susceptibility of laboratory
pathogens including multidrug resistant
organisms which would be especially
ideal in low resource setting and in low
income countries.
Methods:
A) Disc diffusion assay(Kirby-Bauer
method):
Preparation of bacterial inoculum (1-
2108 cfu/ml. Applying it on the agar
surface (Mueller-Hinton) with sterile
swab stick. Commercially-prepared
fixed concentration, paper antibiotic disc
are placed on inoculated agar surface.
Incubate the plates at 37C for 16-
24hrs.The diameter of the zones in
millimetre showing complete inhibition
would be measured. The zone diameter
of each drug are interpreted using the
clinical and laboratory standards
institute (CLSI) guidelines.
The result of the disc diffusion test are
qualitative and categorised as
susceptible, intermediate, resistant.
B) Broth method with incorporation
of resazurin dye.
Preparation of bacterial culture:
Inoculate 3-4 similar looking colonies in
to MH broth (Mueller Hinton) and
incubate at 37C for 1-2 hour until light
to moderate turbidity develops.
Compare the inoculum with that of
standard 0.5 McFarland. Dilute or else
incubate further as necessary to attain
desired turbidity. Alternatively the
desired density can be obtained by
taking OD at 625nm around (0.08-0.13)
and diluted to 1:100 with MH broth.
Preparation of resazurin solution:
The resazurin solution will be prepared
by dissolving resazurin due in D/W.The
solution would be filter sterilized
through 0.22袖m and used. This ready to
use prepared solution is stable fora week
if stored at 4C.
Resazurin reduction test:
Preparation of 96 well microtiter plates
are done with antimicrobial discs of
particular known potencyand pre-placed
in the well under aseptic condition.100袖l
of MH broth added in to the wells.
Finally bacterial inoculum is added of
concentration 510^6 cfu/ml.To all
wells 50袖l of desired concentration of
dye is added. A set of control is kept,
positive control with all solutions and
bacterial inoculum and a negative
control with all solutions except
bacterial inoculum. And a sterility
control of media.
Incubate the plate at 37C and record the
change in colour from blue to pink for
growth development. Gram negative
panel results can be read in 4-8hrs and
gram positive 8-16hrs.The plate would
be further read in ELISA reader at the
3. 3
two wavelengths of 575(blue) and
600(pink) nm.
Preliminary studies:
Standarization of the test:
Standardization of the test was carried
out using standard bacterial strains like
E.coli, P.aeruginosa and S.aureus.
For standardization the parameters
considered where various concentration
of resazurin dye and various
concentration of bacteria
simultaneously.
Concentration of resazurin dye: 0.5mM,
1mM, 1.5mM, 2mM, 2.5mM and 3mM.
Concentration of bacterial inoculum:
108, 107,106,105,104,103,102,101 cfu/ml.
Incubation temperature: 37C.
Controls:
Positive =all solutions with one
concentration of dye and bacteria
Negative =all solutions except bacteria.
Standardisation of test using
antibiotic disc:
The second step was to standardize the
findings with a resistant and sensitive
antibiotic for the standard strains. As, all
the above strains are standard and are
expected to besensitive to all antibiotics.
Concentration of culture:108,107,106,105
cfu/ml.
Concentration of resazurin dye: 0.5mM,
1mM, 1.5mM, 2mM, 2.5mM and 3mM.
Antibiotics used-Amikacin (E.coli)
Oflaxain (P.aeruginosa).
Gentamicin (S.aureus).
The test was put with and without
antibiotic for all the respective cultures
such that without antibiotic plate would
be considered as control to observe the
effect of antibiotic on them.
Note: From all the above trial 106
was considered as appropriate
concentration of culture for gram
negative bacilli but gram positive
being a slow grower conclusion
were not made for them.
Standardization ofdye concentration.
From the above experiments we were
able to deduceappropriate concentration
of the culture i.e. 106cfu/ml (1:100)
dilution of 108 cfu/ml.
Therefore, to decidethe concentration of
the dye to be used, concentration of
bacterial inoculum is kept constant with
varied concentration of dye and
appropriate antibiotic.
To know the sensitivity and resistant
pattern simultaneously Kirby Bauer
method was put.
Antibiotic used:
E.coli
Cotrimox, vacomycin.
P.aeruginosa
Oflaxacin, vancomycin.
S.aureus
Vancomycin.
4. 4
Carry out the test with clinical
isolates.
After obtaining concentration of dye
and bacterial inoculum, the test was
put for clinical isolates and results
were compared with Kirby Bauer
method.
Results:
Standardization of the test:
Standardization of the test using
antibiotic:
Standardization of dye concentration:
Clinical isolate results:
5. 5
20 E.coli isolates-1)Kirby Bauer and
2)Resazurin reduction test.
Amikacin Amox-
clav
Cefotaxi
me
piperacill
in
cotrimox norfloxac
in
Nalidixic
acid
Nitrofura
ntoin
meropenem
1 6mm(R) 6mm(R) 6mm(R) 6mm(R) 6mm(R) 6mm(R) 6mm(R) 16mm(R) 10mm(R)
pink pink pink pink pink pink pink BLUE BLUE
2 6mm(R) 6mm(R) 6mm(R) 6mm(R) 6mm(R) 6mm(R) 6mm(R) 16mm(R) 10mm(R)
pink pink pink pink pink pink pink BLUE BLUE
3 6mm(R) 6mm(R) 6mm(R) 6mm(R) 6mm(R) 6mm(R) 6mm(R) 20mm(S) 11mm(R)
pink pink pink pink pink pink pink BLUE BLUE
4 18mm(S) 6mm(R) 10mm(R) 10mm(R) 14mm(R) 6mm(R) 6mm(R) 18mm(S) 9mm(R)
pink pink pink pink pink pink pink BLUE BLUE
5 20mm(S) 6mm(R) 6mm(R) 6mm(R) 6mm(R) 6mm(R) 6mm(R) 20mm(S) 10mm(R)
pink pink pink pink pink pink pink BLUE BLUE
6 20mm(S) 10mm(R) 25mm(R) 14mm(R) 6mm(R) 6mm(R) 6mm(R) 20mm(S) 16mm(R)
pink pink pink pink pink pink pink BLUE BLUE
7 16mm(R) 6mm(R) 6mm(R) 13mm(R) 6mm(R) 19mm(S) 6mm(R) 19mm(S) 20mm(R)
pink pink pink pink pink pink pink BLUE BLUE
8 20mm(S) 6mm(R) 6mm(R) 9mm(R) 6mm(R) 6mm(R) 6mm(R) 21mm(S) 19mm(R)
pink pink pink pink pink pink pink BLUE BLUE
9 6mm(R) 6mm(R) 6mm(R) 6mm(R) 6mm(R) 6mm(R) 6mm(R) 14mm(R) 10mm(R)
blue pink pink pink pink pink pink BLUE BLUE
10 20mm(S) 6mm(R) 6mm(R) 6mm(R) 6mm(R) 25mm(S) 16mm(R) 18mm(S) 25mm(S)
Blue pink pink pink pink pink pink BLUE BLUE
11 19mm(S) 6mm(R) 6mm(R) 6mm(R) 6mm(R) 26mm(S) 6mm(R) 19mm(S) 17mm(R)
blue pink pink pink pink pink pink BLUE BLUE
12 20mm(S) 6mm(R) 26mm(S) 9mm(R) 6mm(R) 6mm(R) 6mm(R) 18mm(S) 15mm(R)
blue pink pink pink pink pink pink BLUE BLUE
13 6mm(R) 6mm(R) 6mm(R) 6mm(R) 6mm(R) 6mm(R) 6mm(R) 16mm(R) 10mm(R)
pink pink pink pink pink pink pink BLUE BLUE
14 19mm(S) 6mm(R) 6mm(R) 6mm(R) 12mm(R) 6mm(R) 6mm(R) 18mm(S) 12mm(R)
pink pink pink pink pink pink pink BLUE BLUE
15 20mm(S) 6mm(R) 10mm(R) 6mm(R) 6mm(R) 6mm(R) 6mm(R) 19mm(S) 15mm(R)
Blue pink blue pink pink pink pink BLUE BLUE
16 20mm(S) 6mm(R) 8mm(R) 6mm(R) 6mm(R) 6mm(R) 6mm(R) 20mm(S) 15mm(R)
blue pink pink pink pink pink pink BLUE BLUE
17 15mm(R) 14mm(R) 6mm(R) 6mm(R) 6mm(R) 6mm(R) 6mm(R) 18mm(S) 14mm(R)
blue blue pink blue pink pink pink BLUE BLUE
18 20mm(S) 6mm(R) 6mm(R) 6mm(R) 6mm(R) 6mm(R) 6mm(R) 20mm(S) 17mm(R)
pink pink pink blue pink pink pink BLUE BLUE
19 19mm(S) 6mm(R) 6mm(R) 6mm(R) 6mm(R) 6mm(R) 6mm(R) 16mm(R) 11mm(R)
blue pink pink pink pink pink pink BLUE BLUE
20 21mm(S) 15mm(R) 24mm(S) 23mm(S) 6mm(R) 19mm(S) 6mm(R) 15mm(R) 22mm(S)
pink blue pink blue pink pink pink BLUE BLUE
6. 6
This are the comparative result obtained
for 20 E.coli isolates from two methods
Kirby Bauer and resazurin reduction
test.The discrepant results are
highlighted in red colourand thoseresult
obtained for nitrofurantoin and
meropenem cannot be considered as
these two antibiotics being coloured
showed no distinct colour.
Discussion:
We explored the possibility of
evaluating antimicrobial sensitivity
using microtitre formatted antibiotic
discs panels incorporating resazurin dye
which could visually determine the
sensitivity of different pathogens. We
initially attempted to evaluate the assay
using standard strains of
microorganisms.
The objective was to develop a rapid
format for evaluation of MIC so to
enable the physician in choosing the best
appropriate antibiotic for individual
treatment. Attempts were made to
evaluate the time point for dye reduction
by visually comparing the microtitre
plate at different time intervals. It was
observed that the dye reduction depend
upon the number of organisms in the
inoculum and the metabolic activity of
the organisms. Organisms which had an
initial high inoculum and which was
metabolically active e.g. E.coli gave a
reduction in 4 hrs, whereas organisms
which were metabolically less active e.g.
S.aureus or those with low initial
inoculum took time to causereduction in
colour.
Hence, as used during standardization
various concentration of bacterial
inoculum i.e. 108,
107,106,105,104,103,102,101 cfu/ml, from
the result obtained 104,103,102,101
cfu/ml were ruled out as this
concentration had low inoculum to get
result in desired time.
Further, using appropriate antibiotics
like amikacin, oflaxacin and gentamicin
for E.coli, P.aeruginosa and S.aureus
respectively .106 cfu/ml was considered
appropriate concentration in comparison
with time taken for reduction in dye.
Further, to standardize concentration of
dye; bacterial inoculum was kept
constant (106 cfu/ml) and concentration
of dye was varied with combination of
antibiotic like amikacin & gentamicin,
oflaxacin & gentamicin and gentamicin
for E.coli, P.aeruginosa and S.aureus
respectively. Simultaneously Kirby
Bauer method was also done for the
respective organisms with respective
antibiotics to compare the findings. The
results obtained were all sensitive and
both the method finding matched, this
did not helped to deduce the
concentration of antibiotic and hence it
was repeated with other antibiotic
7. 7
combination like cotrimox
&vancomycin, oflaxacin &vancomycin
and vancomycin for E.coli, P.aeruginosa
and S.aureus respectively. After
recording the readings at 575nm and 600
nm, we came to the conclusion that any
one concentration of dye could be used
as the colour change was observed even
at the lowest concentration and decided
to use 0.5mM.
Thus, after getting concentration of
bacterial inoculum and concentration of
resazurin dye to be used, the test was
carried out using clinical isolates for
about 20 E.coli isolates obtained from
urine samples. A 9 panel of antibiotics
were used (amikacin, amox-clav,
cefotaxime, norfloxacin, cotrimox,
pipercallin, nitrofurantoin, meropenem,
nalidixic acid).
The readings were recorded at 575 and
600 nm wavelength and it was observed
that the result obtained from both the
method were at 95% agreement. But for
those antibiotics which are coloured
didntgive a desired coloured and hence,
there was a limitation in interpreting
them.
Our study, thus can be assessed without
instrumentation .The 96 well micro titre
resazurin format could be employed to
determine antimicrobial sensitivity of
8samples with 12 antibiotics and vice
versa. A comparison of visual and
photometric reading of the microtitre
plates showed that the results could be
assessed without instrumentation.
Thus this modified resazurin method is
simple, sensitive, cost effective, rapid
and robust and reliable to assess
antimicrobial suspecibitlity. To support
our findings we would assess more
clinical isolates (900) and thus validate
the testsuchthat it can beused routinely.
References:
1. Microtitre plate-based antibacterial assay
incorporating resazuras an indicator of cell
growth, and its application in the
In vitro antibacterial screening of
phytochemicals
Satyajit D. Sarker, Lutfun Nahar, Yashodharan
Kumarasamy.
2. Development of resazurin microtiter assay
for drug sensibility testing of Trypanosoma
cruzi epimastigotes
Miriam Rol坦n Celeste Vega, Alicia G坦mez-
Barrio Jos辿 A. Escario.
3. Lactobacillus Bacteraemia, Species
Identi鍖cation, and Antimicrobial Susceptibility
of 85 Blood Isolates
M. K. Salminen, H. Rautelin, S. Tynkkynen,
T. Poussa, M. Saxelin, V. Valtonen, and A.
Jarvinen.
4. Spectrophotometric application of resazurin
reduction assay to evaluate boar semen quality
P. zrimsek, j. kunc, m. kosec and j. mrkun
Clinic for Reproduction and Horses,
Veterinary Faculty, University of Ljubljana.
6.Spectrophotometric analysis of resazurin
reduction test and semen quality in men
,Reddy KV,Bordekar AD ,Indian journal of
experimental biology (1999).