This study characterized the interaction between chromatographic beads and the yeast Hansenula polymorpha using atomic force microscopy. Both rigid and elastic beads were tested on H. polymorpha cells immobilized on glass in liquid. The negative Source S bead showed the most reproducible behavior over time. Interaction forces decreased with increasing salt concentration, indicating an electrostatic component. Cell elasticity also varied across growth phases but force spectra did not show a clear trend. Measurements on individual cells yielded higher elastic modulus values than using beads, possibly due to lower pressure over a larger contact area with beads.