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THRIVE: Pollution Viewer

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David Lary
David Lary

Presentation for "Beyond Today's Internet: Experiencing a Smart Future!" at US Ignite and GENI March 23-27 in Washington, DC

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T H R I V E T I M E LY H E A LT H I N D I C AT O R S U S I N G R E M O T E S E N S I N G & I N N O VAT I O N F O R T H E V I TA L I T Y O F T H E E N V I R O N M E N T Why we care so much? Approximately 50 million Americans have allergic diseases, including asthma and allergic rhinitis, both of which can be exacerbated by PM2.5. Every day in America 44,000 people have an asthma attack, and because of asthma 36,000 kids miss school, 27,000 adults miss work, 4,700 people visit the emergency room, 1,200 people are admitted to the hospital, and 9 people die.
THRIVE: Pollution Viewer
THRIVE: Pollution Viewer
PM2.5 Invisible Killer
THRIVE: Pollution Viewer
TypesofbiologicalMaterialTypesofDustTypesofParticulatesGasMolecules 0.0001 ¦Ìm 0.001 ¦Ìm 0.01 ¦Ìm 0.1 ¦Ìm 1 ¦Ìm 10 ¦Ìm 100 ¦Ìm 1000 ¦Ìm Pollen Mold Spores House Dust Mite Allergens Bacteria Cat Allergens Viruses Heavy Dust Settling Dust Suspended Atmospheric Dust Cement Dust Fly Ash Oil Smoke Smog Tobacco Smoke Soot Gas Molecules Decreased Lung Function < 10 ¦Ìm Skin & Eye Disease < 2.5 ¦Ìm Tumors < 1 ¦Ìm Cardiovascular Disease < 0.1 ¦Ìm Hair Pin Cell 0.0001 ¦Ìm 0.001 ¦Ìm 0.01 ¦Ìm 0.1 ¦Ìm 1 ¦Ìm 10 ¦Ìm 100 ¦Ìm 1000 ¦Ìm PM10 particles PM2.5 particles PM0.1 ultra ?ne particles PM10-2.5 coarse fraction 0.1 mm 1 mm Table!1.!PM!and!health!outcomes!(modified!from!Ruckerl*et*al.!(2006)).! !! Health*Outcomes! Short9term*Studies* Long9term*Studies* PM10! PM2.5! UFP! PM10! PM2.5! UFP! Mortality* !! !! !! !! !! !! !!!!All!causes! xxx!! xxx!! x! xx! xx! x! !!!!Cardiovascular! xxx! xxx! x!! xx! xx! x! !!!!Pulmonary! xxx! xxx! x! xx! xx! x! Pulmonary!effects! !! !! !! !! !! !! !!!!Lung!function,!e.g.,!PEF! xxx! xxx! xx! xxx! xxx! !! !!!!Lung!function!growth! !! !! !! xxx! xxx! !! Asthma!and!COPD!exacerbation! !! !! !! !! !! !! !!!!Acute!respiratory!symptoms! !! xx! x! xxx! xxx! !! !!!!Medication!use! !! !! x! !! !! !! !!!!Hospital!admission! xx! xxx! x! !! !! !! Lung!cancer! !! !! !! !! !! !! !!!!Cohort! !! !! !! xx! xx! x! !!!!Hospital!admission! !! !! !! xx! xx! x! Cardiovascular!effects! !! !! !! !! !! !! !!!!Hospital!admission! xxx! xxx! !! x! x! !! ECG@related!endpoints! !! !! !! !! !! !! !!!!Autonomic!nervous!system! xxx! xxx! xx! !! !! !! !!!!Myocardial!substrate!and!vulnerability! !! xx! x! !! !! !! Vascular!function! !! !! !! !! !! !! !!!!Blood!pressure! xx! xxx! x! !! !! !! !!!!Endothelial!function! x! xx! x! !! !! !! Blood!markers! !! !! !! !! !! !! !!!!Pro!inflammatory!mediators! xx! xx! xx! !! !! !! !!!!Coagulation!blood!markers! xx! xx! xx! !! !! !! !!!!Diabetes! x! xx! x! !! !! !! !!!!Endothelial!function! x! x! xx! !! !! !! Reproduction! !! !! !! !! !! !! !!!!Premature!birth! x! x! !! !! !! !! !!!!Birth!weight! xx! x! !! !! !! !! !!!!IUR/SGA! x! x! !! !! !! !! Fetal!growth! !! !! !! !! !! !! !!!!Birth!defects! x! !! !! !! !! !! !!!!Infant!mortality! xx! x! !! !! !! !! !!!!Sperm!quality! x! x! !! !! !! !! Neurotoxic!effects! !! !! !! !! !! !! !!!!Central!nervous!system!! !! x! xx! !! !! !! x, few studies; xx, many studies; xxx, large number of studies.
Hourly Measurements from 55 countries and more than 8,000 measurement sites from 1997-present
Aqua DeepBlue Rank Source Variable Type 1 Satellite Product Tropospheric NO2 Column Input 2 Satellite Product Solar Azimuth Input 3 Meteorological Analyses Air Density at Surface Input 4 Satellite Product Sensor Zenith Input 5 Satellite Product White-sky Albedo at 470 nm Input 6 Population Density Input 7 Satellite Product Deep Blue Surface Re?ectance 470 nm Input 8 Meteorological Analyses Surface Air Temperature Input 9 Meteorological Analyses Surface Ventilation Velocity Input 10 Meteorological Analyses Surface Wind Speed Input 11 Satellite Product White-sky Albedo at 858 nm Input 12 Satellite Product White-sky Albedo at 2,130 nm Input 13 Satellite Product Solar Zenith Input 14 Meteorological Analyses Surface Layer Height Input 15 Satellite Product White-sky Albedo at 1,240 nm Input 16 Satellite Product Deep Blue Surface Re?ectance 660 nm Input 17 Satellite Product Deep Blue Surface Re?ectance 412 nm Input 18 Satellite Product White-sky Albedo at 1,640 nm Input 19 Satellite Product Sensor Azimuth Input 20 Satellite Product Scattering Angle Input 21 Meteorological Analyses Surface Velocity Scale Input 22 Satellite Product Cloud Mask Qa Input 23 Satellite Product White-sky Albedo at 555 nm Input 24 Satellite Product Deep Blue Aerosol Optical Depth 550 nm Input 25 Satellite Product Deep Blue Aerosol Optical Depth 660 nm Input 26 Satellite Product Deep Blue Aerosol Optical Depth 412 nm Input 27 Meteorological Analyses Total Precipitation Input 28 Satellite Product White-sky Albedo at 648 nm Input 29 Satellite Product Deep Blue Aerosol Optical Depth 470 nm Input 30 Satellite Product Deep Blue Angstrom Exponent Land Input 31 Meteorological Analyses Surface Speci?c Humidity Input 32 Satellite Product Cloud Fraction Land Input In-situ Observation PM2.5 Target
This is a BigData Problem of Great Societal Relevance ? Collecting data in real time from national and global networks requires bandwidth. ? With the next generation of wearable sensors and the internet of things this data volume will rapidly increase. ? A variety of applications enabled by BigData, higher bandwidth and cloud processing. ? Future ?ner granularity and two way communication will dramatically increase the size of the data bringing air quality to the micro scale, just like weather data. Time Taken 10 Mbps 20 Mbps 50 Mbps 1 Gbps 40 TB training data 4 Gb update 185 days 93 days 37 days 1 day 21 hours 54m 27m 11m 32s
Long-Term Average 1997-present
Think Big: Holistic & Comprehensive Informatics Bio ?Informa+cs Medical ?Informa+cs Environmental ?Informa+cs THRIVE ? Mul+ple ?Big ?Data ?+ ?EMR ?+ ?Social ?Media ?+ ?Machine ?Learning ?+ ?Causality ? A ?Cross-?©\cuBng ?PlaDorm ?for ?Comprehensive ?Informa+cs ?for ?Data ?Driven ?Decisions ?in ?Pa4ent ? Centered ?Care ?facilitated ?by ?High ?Speed ?Low-?©\Latency ?networks, ?mul+ple ?massive ?datasets ?from ? large ?distributed ?sensor ?networks, ?EMR, ?and ?local ?cloud ?compu:ng.
12 VA Decision Support Tools More Than 40 Data Products from In-situ Observations, NASA Earth Observations, Earth System Models, Population Density & Emission Inventories Personalized Alerts Dr. Watson Staf?ng & Resource Management Machine Learning Daily Global Air Quality Estimates NASA Earth Observation Data NASA Earth System Model Products Population Density and Other Related Products ER Admissions All ICD Codes All Prescriptions Machine Learning Machine Learning THRIVE Medical Environment Analytics Engine

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THRIVE: Pollution Viewer

  • 1. T H R I V E T I M E LY H E A LT H I N D I C AT O R S U S I N G R E M O T E S E N S I N G & I N N O VAT I O N F O R T H E V I TA L I T Y O F T H E E N V I R O N M E N T Why we care so much? Approximately 50 million Americans have allergic diseases, including asthma and allergic rhinitis, both of which can be exacerbated by PM2.5. Every day in America 44,000 people have an asthma attack, and because of asthma 36,000 kids miss school, 27,000 adults miss work, 4,700 people visit the emergency room, 1,200 people are admitted to the hospital, and 9 people die.
  • 6. TypesofbiologicalMaterialTypesofDustTypesofParticulatesGasMolecules 0.0001 ¦Ìm 0.001 ¦Ìm 0.01 ¦Ìm 0.1 ¦Ìm 1 ¦Ìm 10 ¦Ìm 100 ¦Ìm 1000 ¦Ìm Pollen Mold Spores House Dust Mite Allergens Bacteria Cat Allergens Viruses Heavy Dust Settling Dust Suspended Atmospheric Dust Cement Dust Fly Ash Oil Smoke Smog Tobacco Smoke Soot Gas Molecules Decreased Lung Function < 10 ¦Ìm Skin & Eye Disease < 2.5 ¦Ìm Tumors < 1 ¦Ìm Cardiovascular Disease < 0.1 ¦Ìm Hair Pin Cell 0.0001 ¦Ìm 0.001 ¦Ìm 0.01 ¦Ìm 0.1 ¦Ìm 1 ¦Ìm 10 ¦Ìm 100 ¦Ìm 1000 ¦Ìm PM10 particles PM2.5 particles PM0.1 ultra ?ne particles PM10-2.5 coarse fraction 0.1 mm 1 mm Table!1.!PM!and!health!outcomes!(modified!from!Ruckerl*et*al.!(2006)).! !! Health*Outcomes! Short9term*Studies* Long9term*Studies* PM10! PM2.5! UFP! PM10! PM2.5! UFP! Mortality* !! !! !! !! !! !! !!!!All!causes! xxx!! xxx!! x! xx! xx! x! !!!!Cardiovascular! xxx! xxx! x!! xx! xx! x! !!!!Pulmonary! xxx! xxx! x! xx! xx! x! Pulmonary!effects! !! !! !! !! !! !! !!!!Lung!function,!e.g.,!PEF! xxx! xxx! xx! xxx! xxx! !! !!!!Lung!function!growth! !! !! !! xxx! xxx! !! Asthma!and!COPD!exacerbation! !! !! !! !! !! !! !!!!Acute!respiratory!symptoms! !! xx! x! xxx! xxx! !! !!!!Medication!use! !! !! x! !! !! !! !!!!Hospital!admission! xx! xxx! x! !! !! !! Lung!cancer! !! !! !! !! !! !! !!!!Cohort! !! !! !! xx! xx! x! !!!!Hospital!admission! !! !! !! xx! xx! x! Cardiovascular!effects! !! !! !! !! !! !! !!!!Hospital!admission! xxx! xxx! !! x! x! !! ECG@related!endpoints! !! !! !! !! !! !! !!!!Autonomic!nervous!system! xxx! xxx! xx! !! !! !! !!!!Myocardial!substrate!and!vulnerability! !! xx! x! !! !! !! Vascular!function! !! !! !! !! !! !! !!!!Blood!pressure! xx! xxx! x! !! !! !! !!!!Endothelial!function! x! xx! x! !! !! !! Blood!markers! !! !! !! !! !! !! !!!!Pro!inflammatory!mediators! xx! xx! xx! !! !! !! !!!!Coagulation!blood!markers! xx! xx! xx! !! !! !! !!!!Diabetes! x! xx! x! !! !! !! !!!!Endothelial!function! x! x! xx! !! !! !! Reproduction! !! !! !! !! !! !! !!!!Premature!birth! x! x! !! !! !! !! !!!!Birth!weight! xx! x! !! !! !! !! !!!!IUR/SGA! x! x! !! !! !! !! Fetal!growth! !! !! !! !! !! !! !!!!Birth!defects! x! !! !! !! !! !! !!!!Infant!mortality! xx! x! !! !! !! !! !!!!Sperm!quality! x! x! !! !! !! !! Neurotoxic!effects! !! !! !! !! !! !! !!!!Central!nervous!system!! !! x! xx! !! !! !! x, few studies; xx, many studies; xxx, large number of studies.
  • 7. Hourly Measurements from 55 countries and more than 8,000 measurement sites from 1997-present
  • 8. Aqua DeepBlue Rank Source Variable Type 1 Satellite Product Tropospheric NO2 Column Input 2 Satellite Product Solar Azimuth Input 3 Meteorological Analyses Air Density at Surface Input 4 Satellite Product Sensor Zenith Input 5 Satellite Product White-sky Albedo at 470 nm Input 6 Population Density Input 7 Satellite Product Deep Blue Surface Re?ectance 470 nm Input 8 Meteorological Analyses Surface Air Temperature Input 9 Meteorological Analyses Surface Ventilation Velocity Input 10 Meteorological Analyses Surface Wind Speed Input 11 Satellite Product White-sky Albedo at 858 nm Input 12 Satellite Product White-sky Albedo at 2,130 nm Input 13 Satellite Product Solar Zenith Input 14 Meteorological Analyses Surface Layer Height Input 15 Satellite Product White-sky Albedo at 1,240 nm Input 16 Satellite Product Deep Blue Surface Re?ectance 660 nm Input 17 Satellite Product Deep Blue Surface Re?ectance 412 nm Input 18 Satellite Product White-sky Albedo at 1,640 nm Input 19 Satellite Product Sensor Azimuth Input 20 Satellite Product Scattering Angle Input 21 Meteorological Analyses Surface Velocity Scale Input 22 Satellite Product Cloud Mask Qa Input 23 Satellite Product White-sky Albedo at 555 nm Input 24 Satellite Product Deep Blue Aerosol Optical Depth 550 nm Input 25 Satellite Product Deep Blue Aerosol Optical Depth 660 nm Input 26 Satellite Product Deep Blue Aerosol Optical Depth 412 nm Input 27 Meteorological Analyses Total Precipitation Input 28 Satellite Product White-sky Albedo at 648 nm Input 29 Satellite Product Deep Blue Aerosol Optical Depth 470 nm Input 30 Satellite Product Deep Blue Angstrom Exponent Land Input 31 Meteorological Analyses Surface Speci?c Humidity Input 32 Satellite Product Cloud Fraction Land Input In-situ Observation PM2.5 Target
  • 9. This is a BigData Problem of Great Societal Relevance ? Collecting data in real time from national and global networks requires bandwidth. ? With the next generation of wearable sensors and the internet of things this data volume will rapidly increase. ? A variety of applications enabled by BigData, higher bandwidth and cloud processing. ? Future ?ner granularity and two way communication will dramatically increase the size of the data bringing air quality to the micro scale, just like weather data. Time Taken 10 Mbps 20 Mbps 50 Mbps 1 Gbps 40 TB training data 4 Gb update 185 days 93 days 37 days 1 day 21 hours 54m 27m 11m 32s
  • 11. Think Big: Holistic & Comprehensive Informatics Bio ?Informa+cs Medical ?Informa+cs Environmental ?Informa+cs THRIVE ? Mul+ple ?Big ?Data ?+ ?EMR ?+ ?Social ?Media ?+ ?Machine ?Learning ?+ ?Causality ? A ?Cross-?©\cuBng ?PlaDorm ?for ?Comprehensive ?Informa+cs ?for ?Data ?Driven ?Decisions ?in ?Pa4ent ? Centered ?Care ?facilitated ?by ?High ?Speed ?Low-?©\Latency ?networks, ?mul+ple ?massive ?datasets ?from ? large ?distributed ?sensor ?networks, ?EMR, ?and ?local ?cloud ?compu:ng.
  • 12. 12 VA Decision Support Tools More Than 40 Data Products from In-situ Observations, NASA Earth Observations, Earth System Models, Population Density & Emission Inventories Personalized Alerts Dr. Watson Staf?ng & Resource Management Machine Learning Daily Global Air Quality Estimates NASA Earth Observation Data NASA Earth System Model Products Population Density and Other Related Products ER Admissions All ICD Codes All Prescriptions Machine Learning Machine Learning THRIVE Medical Environment Analytics Engine